Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1871 |
Symbol | |
ID | 7266362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2291945 |
End bp | 2293699 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643566708 |
Product | Fibronectin-binding A domain protein |
Protein accession | YP_002463202 |
Protein GI | 219848769 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0246704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTCG ATGCTCTTAC CCTTGCCGCC GTTGTTGATG AGTTACGGGC AACAATTTTG TTTGGACGCA TCCAGCGCGT TCTACTCCTT GGGCCGTTGA CGATCGGCTT GGAGGTCTAT GCTCACGGCC AACGTCGGTA TGTGATCGCC TCCGCCGATG CGCAAACGGC GCGCATTCAT TTGGTCAGTC AACGACTAAC CCGTGGCGTT GATGGTGAAA CGCCGTTTTT ACTCCTTATG CGCAAATACA TACTCGGTGG GCGAATCGTG AATATTGAGC AACCGCCCTA CGAACGAGTC GTTTTGTTCA GTATAACGAA ACCGGCGGAG TCGCGCAAAC GCTCACATTC ATCTGATCCT GATGAAGTGA TCCTTGACGA ACTGGATGAT GATGAGACGG AGGAGACCGA CGAGTGGTTG CACTGCGATC TCATTGTGGA GCCACAAGAT CGGCGGAGCA ACATCATACT GGTTGATGAT AACAATCTGA TCCTCGATGC GATCAAGCGG GTGACGCCGC GGATGAGTAG TCGGGTGATT ATGCCACGTC GGGTCTATAC GCTGCCGCCG GCGCCGGACA AGCGTGATCC GTTGCGGGCC AATGCAGCCG AGATTGAAGC GATTATGGGT GTCGGTGATC CGGTAAAAGC GCTCGTCAAT GCTTACCGTG GCATCTCGCC ACAGGTGGCG CGTGAGGTGT TAGTACGGGC CTGTGGCGTC CTGCCGACGA GTGGAACGGG CTTGCCGACA TACACCATTG CGGCTCGGCT GCGTGAGATC GTTGCCGTCC CACCCGAACC ACATCTGGTC AACGATGAGA CCGGGCCGAT TGCCTACGCA CCCTACCGGC CACTTCACTT ACCCGGTGCG GTGCCGATGG CGAGTATGAG TGAGGCGCTG GAAGTCTTCT ACACCGCGCG CCAACAACCA CTGGGGCGAG ATCGGCGACG GGCCGATCTC GAGGCGCAGT TGCAGGCCAG TCGCGAGCAG CTTCTTCACC AACGGGAACA GATCGTCAAT GAATTGGCGC GGGTCAACGA ACTCGACCGT CTGCGGTGGG AAGGTGAGAT GATCTTCGCT TTTCTTCACC AATTACCACG CGGTGCAACA GAATTGGTGG TAGAGGGTGA ACGGATCGCC CTCGATCCAA ACCGGTCGCC AGTTGAACAG GCACAAGAAC GGTTTAAGGC GTATGAAAAA GCGAAGAGTG CTCGTGCCAT CTTGCCGGCA CGACTCGCCG AAACAGAGAA CCGGCTGGCC GGTCTCGACC AATTGTTGGC GATGTTAGCC ATTGCCGACG ATGCTACCCA GATTGACCTG ATCGCGGCTG AAGCGGAAGA AGCCGGGTAT CTCCGCACAT CGGCGGTGCG ACGACAACGA CCACGTGGCC GACCACTACA GGTACGTTCA AGCGACGGCT TACCGATCTA CATTGGGCGA ACAGCTCGCC AGAACGAAGA AGTCACCTTT CGTATCGCTC GTCCCACCGA TCTCTGGCTC CACGCCCGCA ACATCCACGG CGCCCACGTC ATCATTCGTG CCGACCATCC GCCCGAACGA ACGATTGCCG AGGCAGCAGC ACTCGCAGCG TATTACAGTC AGGCGCGAGA TGATACGGCG GTAGAAGTTG ACATTTGCCA ACGACGAGCC GTGCGCAAGA TTCCCGGTGG ACCAACCGGA TTGGTCAGCT ACTATCCCGA ACGCACAGTA CGGGTAAAGC CGGAGCGGTG TGGTGAAGTG GTACAAAAGT CGTAG
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Protein sequence | MYFDALTLAA VVDELRATIL FGRIQRVLLL GPLTIGLEVY AHGQRRYVIA SADAQTARIH LVSQRLTRGV DGETPFLLLM RKYILGGRIV NIEQPPYERV VLFSITKPAE SRKRSHSSDP DEVILDELDD DETEETDEWL HCDLIVEPQD RRSNIILVDD NNLILDAIKR VTPRMSSRVI MPRRVYTLPP APDKRDPLRA NAAEIEAIMG VGDPVKALVN AYRGISPQVA REVLVRACGV LPTSGTGLPT YTIAARLREI VAVPPEPHLV NDETGPIAYA PYRPLHLPGA VPMASMSEAL EVFYTARQQP LGRDRRRADL EAQLQASREQ LLHQREQIVN ELARVNELDR LRWEGEMIFA FLHQLPRGAT ELVVEGERIA LDPNRSPVEQ AQERFKAYEK AKSARAILPA RLAETENRLA GLDQLLAMLA IADDATQIDL IAAEAEEAGY LRTSAVRRQR PRGRPLQVRS SDGLPIYIGR TARQNEEVTF RIARPTDLWL HARNIHGAHV IIRADHPPER TIAEAAALAA YYSQARDDTA VEVDICQRRA VRKIPGGPTG LVSYYPERTV RVKPERCGEV VQKS
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