| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1838 |
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| Symbol | |
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| ID | 7267750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 2254906 |
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| End bp | 2255763 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643566674 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002463169 |
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| Protein GI | 219848736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGCAG AATCGACCCT AACGGCGGAA ATTATCTTGA TCGGTGATCC GGTCGCACAT
TCACGTTCGC CCGCAATGCA TAACGCGGCG CTCGCTGCTC TTGGCATTGC TGCACGCTAT
CGTGCTGTGC AAACCTCGGC TGCCGAGTTA CCACAGCGGA TTGCCGACCT ACGCCGAGCG
GAGTTCCTCG GCGCAAATGT GACGTTGCCC CATAAGCAGG CTGTAATGGC GTTGCTTGAT
GAGATCGAAC CCATCGCTGC CCGGATCGGC GCAGTCAATA CGATTATTCG TCAACCCGAC
GGTCGCTTGG TGGGTACGAA TACCGATGCC CCAGGGTTGC TGGCCGATTT AGCTGCTGCG
GCATGGTCGC CGGCCGGTCA AGCCGTGGTG ATTTTAGGAG CGTCAGGGGC CGCACGGGCT
GCTGCGTTTG CGCTGGCCGA TGCCGGTGTC GCTGCACTCA CGATTGTCAA TCGCCATCTT
ATGCGCGCGG TTGAGGTAGC TGCGGCTGTG GCGGCTAATC AACCGGCGCT GCACGTGCGT
GCATTAGCCT TGACCGATCC GACCGTGGCC GACGCCGTGG CTGACTGTAC GTTATTGATT
AACGCTACAG CGCTTGGTTG GCACGATGGC GAAACGCCAT TGCCCGATCC ACCGGTCGGC
CCGCATTGTC TGGTCTATGA TATGGTCTAC CGCGAAACGA CCCTTTTGCG GACAGCCGCA
ATGCGTGGCG CGCACGTGCG TGATGGGCGG GGCATGTTGG TTGAGCAAGG TGCGCTCGCG
TTCGAGCGTT GGACCGGGCA TCCGGCACCA CGAGACGTGA TGTGGCAGGC CGCTTTTGGG
GTGGAGCACA GACAATGA
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| Protein sequence | MPAESTLTAE IILIGDPVAH SRSPAMHNAA LAALGIAARY RAVQTSAAEL PQRIADLRRA
EFLGANVTLP HKQAVMALLD EIEPIAARIG AVNTIIRQPD GRLVGTNTDA PGLLADLAAA
AWSPAGQAVV ILGASGAARA AAFALADAGV AALTIVNRHL MRAVEVAAAV AANQPALHVR
ALALTDPTVA DAVADCTLLI NATALGWHDG ETPLPDPPVG PHCLVYDMVY RETTLLRTAA
MRGAHVRDGR GMLVEQGALA FERWTGHPAP RDVMWQAAFG VEHRQ
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