Gene Cagg_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1834 
Symbol 
ID7267746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2249961 
End bp2251157 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content55% 
IMG OID643566670 
Product(Uracil-5)-methyltransferase 
Protein accessionYP_002463165 
Protein GI219848732 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGACGA CATTTACGGC CAAAACTCTG CGCAAAGCGG TGATGGCACG CACGCTCACC 
GGTCAGATGG TTGTGCCGCG CTGTCCGCAT GCTCGGGAGT GTGGGGGTTG CGCATTTCAA
GACCGGTCGT ATACCGATCA GGTAACTGCC AAGACAGACG TGTTACGTGA ACTGTACGCA
ACCGGGGGGA TTGCAGTTGA CGAGTTTATC GTGATACCAT CACCAAATCC GTTTGCCTAC
CGCACGCGGA TGGATTACGT CGCTACGAAG GGCCGCTTTG GGCTACGTGC GCGGGGTAAG
TTTAACTATA TTATCGAGCT AACCACGTGT CACCTGATCC CACCAACGGC TTTCGCGGCA
GCGCGAGCTG TTTGGCAACG GGCCGGCGAG CTAGGGATAG CCGATTATGA CATTCGCACG
CATACCGGTT TTCTACGCTA CATCGTCGTT CGGCGCAACG CAATGGATGA ACTCCTGTTG
GCGGCGGTTA CCGCAGCCGG TGGCGATGAA GAGACAATGA CCGAATTAGC AACGACAGCA
TTAGCTCAAG CGGGTGTGGT TGGCTTTCAC TGGCTTATCA ATGATACGCT CACCGACGTG
TCATTCGGTG AGCCGCGACG GCATTGGGGT GCTGCAACGT TGGCGATGCG GATCGGGGAA
ATGACGTGTT TTATCGGTCC CAATACATTC TTTCAGAACA ACGTCTATTT AGCCGACCGG
CTGATCGGTG ATGCCGTAGC TGCGGCTAAC CCTAACCCGA CAATGCGCGT CGCCGACCTT
TACGGTGGGG TCGGTGCCAT TGGGCTGCAT TTGGCCCGAC GGGCAGCCGT CGTTGATTGT
GTGGAGGCGG TAGCGGAGAG TGCAACCTTA GCTCAGCACA ATGCGGTGGT CAATGGAATC
ACCAACTTCA ACCCGATCTG CGCTGACACC CTTGCCTACT TACAAGCACA ACCGAGTGGC
AGCTTACCGT TGATCGTAGC CGATCCACCA CGGACCGGAT TAGGGCCGCA GGTGTGCAAA
GAACTGCTCA GGATTGGAGC ACAGCGGATC GTTTATGTCT CGTGTAATCC ATTAACCCAG
GTCAGCGATC TTCGCCTTTT GCAAGCGGCA TACCGGGTTA CCGATTTACG TGGTTACGAT
ATGTTTCCAC ACACACCGCA CGTTGAAACG ATTGCTGTCT TGGAACGAAG CGGGTAA
 
Protein sequence
MVTTFTAKTL RKAVMARTLT GQMVVPRCPH ARECGGCAFQ DRSYTDQVTA KTDVLRELYA 
TGGIAVDEFI VIPSPNPFAY RTRMDYVATK GRFGLRARGK FNYIIELTTC HLIPPTAFAA
ARAVWQRAGE LGIADYDIRT HTGFLRYIVV RRNAMDELLL AAVTAAGGDE ETMTELATTA
LAQAGVVGFH WLINDTLTDV SFGEPRRHWG AATLAMRIGE MTCFIGPNTF FQNNVYLADR
LIGDAVAAAN PNPTMRVADL YGGVGAIGLH LARRAAVVDC VEAVAESATL AQHNAVVNGI
TNFNPICADT LAYLQAQPSG SLPLIVADPP RTGLGPQVCK ELLRIGAQRI VYVSCNPLTQ
VSDLRLLQAA YRVTDLRGYD MFPHTPHVET IAVLERSG