Gene Cagg_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1825 
Symbol 
ID7267737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2238694 
End bp2239080 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID643566663 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_002463158 
Protein GI219848725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTT ACGTGTGGCT TTGGTTCATT GGGCTGCTGA TCGTATCGGT GAGTATGGGG 
CTAACCGCGT GCTTTCCAGA GCCGCCGCCG CACAACTTGC CTACCTTGCC GGTCGTGCTC
GACATTACCC CTGCCCCAAC CATCGATCTC GACGCAACGG CGACGGTCTA TGCCAGTTTG
TCGCGCCCAA CCCCAACGGT TGCCGCGTTG TACGTTGTCC AGGCCGGTGA TACGCTTAGT
ACAATTGCCG AACGCTTTGG GGTGACGGTT GATGAATTGG TAGCAGCCAA CAATCTGACC
GATCCCAACT TCCTCCAGCC CGGGCAGACG TTACTCATTC CATCGTTAGT CGGCACGCCA
CAACCAATCC CCACACCGAC ACCGTGA
 
Protein sequence
MIRYVWLWFI GLLIVSVSMG LTACFPEPPP HNLPTLPVVL DITPAPTIDL DATATVYASL 
SRPTPTVAAL YVVQAGDTLS TIAERFGVTV DELVAANNLT DPNFLQPGQT LLIPSLVGTP
QPIPTPTP