Gene Cagg_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1788 
Symbol 
ID7267700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2194074 
End bp2194559 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID643566628 
Producthypothetical protein 
Protein accessionYP_002463123 
Protein GI219848690 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.370056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGT TCCGCCGTGT CCGGTTACTT ATCGCCCGAC TCTCTGCTAC CCGGTTCGGA 
GCATGGTTTG TGCGCACCTG TATTCAACCG CTCGATCGGC TGCTGCTGTG GCTCACAGGA
GGACGGATAG GAGTCGTCTC GTTATTCTAC CCGACGCTCA TCCTTATTAC CACCGGTGCC
CGCAGCGGCA CACAACGGCG CACACCACTG ATCTTTCTCC CTGACGGCAA TCGGATCGTA
CTGGTCGCGT CAAATTTTGG CCGTGACCGT CATCCCGGCT GGTACTACAA CCTGCGCGCC
AATCCGCAGG CGCAGGTGAA TATTTACGGC CACCTCTTCG AGTGTCGCGC GCGCGAAGTG
AGTGGGATCG AGTATCTGGA ACTGTGGGAG CGGGCGGTGC GTTACTATCC CGGCTTTGCC
GTCTACGCCG GCCGTTCCGG ACGCACCATC CCGATAGTGG TACTCGAACT CAATACGCCC
ATCTAA
 
Protein sequence
MRMFRRVRLL IARLSATRFG AWFVRTCIQP LDRLLLWLTG GRIGVVSLFY PTLILITTGA 
RSGTQRRTPL IFLPDGNRIV LVASNFGRDR HPGWYYNLRA NPQAQVNIYG HLFECRAREV
SGIEYLELWE RAVRYYPGFA VYAGRSGRTI PIVVLELNTP I