| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1749 |
|---|
| Symbol | |
|---|
| ID | 7269455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2137893 |
|---|
| End bp | 2139509 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643566591 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002463086 |
|---|
| Protein GI | 219848653 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.483604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGAT CAGATGAACG ATTACAGATA TTGCACATGG CCCGATCTGA GGTATTGGCC
GGACGCATGA GCCGGCGCGC TTTTTTACGG CTTGGGCTGG CACTTGGTCT CTCGGCAGGA
GCAACGGCAT TAGTAGCATG TAGTAACCCT TCACCCACAC CCACACCTGT TCAATCTGCA
CCGACTCCTA CCGGAGCTGG TGGTCGTTTG CGTGTCGCTA CAGAGATTCC CGTACAACTC
GACCCGGCAT TCGCGTCTTC CGATGCCGAA ATCCTGATTT TGAATCATGT GTATGATTAC
CTGGTCGATA TCGATGCCAA CAATGCCATT ACACCTCGCC TTGCCCGCGA GTGGACGGTT
AGCGATGATG GTTTGCGCTA TCGCTTCACC CTTCACGACG GGGTAACATT TCACGACGGC
AGTCGCCTGA CCGCCGCCGA TGTGGTATGG ACGTTTAATC GCCTGCGCGA TCCCGCTCTC
CAATTGCCAA CTGCCGATCT CTACGCCAAT ATTGCCGATA TCGCTGAGGA AAACGAAACT
ACGGTTGCTT TTACCTTGTC AGAACCCAAC CCCTTCTTCC TCTACGATCT ATCGGATAAT
CACGCCCTCA TTCTGCGTGC CGGAACGACA AATGCAGCAA CGTCGTTCAA TGGGACCGGC
CCCTTCAAGG TCGTCGAATA TCGCACCGAG AATCGGATCG ATCTGGTTGC AGCCACACCC
TATTTTCAGG CCGGTAAGCC TCTCGTCTCT GCGCTAGAGA TTATCTTCTT TGCCGATCAA
GCAGCGGCCG TTGATGCGTT GCGTGGCGGG CAGGTCGATC TGGTGCTGCG GATGCCAACG
CCGTTGTTCC AAACGCTGCA ACAAACCACC GGCATTGTCA CCGTACAAAC GCCAACTAAC
GGTTTTGATC TGGTGCGATT ACGATCTGAC CGTGAACCGG GTAATAAACC AGAGGTGATC
CGTGCGCTCA AACTGGCGAC CGACCGGCAA GCTATCTTCC AACAGGTGAA GGCCGGGTTG
GGTGCTGTTG GACGCGATAG CCCGATCGGA CCGCTCTTTA GCGCGTACTA TTCGGAAGAG
ACGCCGTTGC CACCGCGCGA TCCGGCGGCA GCCCGCGCGT TACTCGAAAC AGCCGGTTAT
CGTGATGGCT TGAAGCTCGA TCTCCATGTA CCCGATTCAG GTGACCGGCC TGATCTGGCA
GTGGTGCTGA AGGAGCAATG GGCCGAAGCC GGGATTGATG TTAACGTGAT CGTCGAACCC
GAAAGTGTCT ACTATGGCGA TGATCGGTGG CTCGAAGTCG ATCTCGGGAT TACCGGCTGG
GGTTCACGTC CGGTACCACA ATTTTATCTC GATGTGATGC TGGTCAGCGG AGCAATTTGG
AACGAGAGCC ACTTTAGCGA TGCCGAATTC GATGCACTCG CAGCTCTTGC CCGCACTACG
CTCAACGAGG ACGAACGTGT CCGGGCGTAT CGGGAGATCC AGCGGATTCT GATCGAGCGC
GGGCCGATTA TTATTCCCTA TTTCTTTGCT CAGCTTAGTG CGCATCGCGA AGGTCTGCGC
GGATATGTTG CGAAAGCTTT TCCCGGTCGC ACCGATTTGG CAAGTATTGC TGTTTAG
|
|---|
| Protein sequence | MHGSDERLQI LHMARSEVLA GRMSRRAFLR LGLALGLSAG ATALVACSNP SPTPTPVQSA
PTPTGAGGRL RVATEIPVQL DPAFASSDAE ILILNHVYDY LVDIDANNAI TPRLAREWTV
SDDGLRYRFT LHDGVTFHDG SRLTAADVVW TFNRLRDPAL QLPTADLYAN IADIAEENET
TVAFTLSEPN PFFLYDLSDN HALILRAGTT NAATSFNGTG PFKVVEYRTE NRIDLVAATP
YFQAGKPLVS ALEIIFFADQ AAAVDALRGG QVDLVLRMPT PLFQTLQQTT GIVTVQTPTN
GFDLVRLRSD REPGNKPEVI RALKLATDRQ AIFQQVKAGL GAVGRDSPIG PLFSAYYSEE
TPLPPRDPAA ARALLETAGY RDGLKLDLHV PDSGDRPDLA VVLKEQWAEA GIDVNVIVEP
ESVYYGDDRW LEVDLGITGW GSRPVPQFYL DVMLVSGAIW NESHFSDAEF DALAALARTT
LNEDERVRAY REIQRILIER GPIIIPYFFA QLSAHREGLR GYVAKAFPGR TDLASIAV
|
|---|
| |