Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1708 |
Symbol | |
ID | 7269414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2087979 |
End bp | 2089313 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643566550 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002463045 |
Protein GI | 219848612 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTGA CGTGTGCCGG TGCGGTGCGG TTTAGCAGTC GTAATCTAGA CGAAATCTGG TTGCTTTCAG GGTTATTGAC CTCGCTGCAA GCAGTTATTT TTGGTTTTTT GATTTGGCTG ATTATGCTCT TGTTCATGCC CCACCGCTAC CAACAACCAT GGTTGCGTTG GGCAGTATTC ACACCATACC TCCTTATGGC CGTAGGGCTG GTCATCGATT GGTATGGTCG CTTTGGCTTT GTCGGTCGTG ATGTGGTGCG TGAAACGAGC GGTCTGTTGG GCTTTGTGCG CGGCCCGGCA TTCGTACCAG CCTTTACGCT GTACATCATC GGCTGCATTG TCATCCCGCT CATTATGCTC ATCACCATCG CAATCCGACA ACCTGCTATG CGCGGGCCGG CGGTCTGGCT CATTATCGGT ACTATCCTGA CGTTCCTTAT GGGATATATC TTTCGGGAAA TTGGCCTGGT GTCGGTGACG TATGTTAGTC TCTTACCATT ACATTTGTCT TTTGGGTGGG TCACGCTACG CTACGGTGTC TTTCGCCCTT CGCAAGTTGC GTTGCAAGCG GCGGTCGAAC ATCTACCTGA CGGAATGCTC GTGCTCGACA CGCAACGACA GATACGCTAC GCCAATCGTG CGGCGCAACG CATTATCGCA GGAAACGATA GAAATGAGCA GAGCTTCGAG CAAGCCCTTG CCCAAGCGGG GTTCATCGAG CAGACGTCAA CCGAAGATCG TGAGCGGCAG CGACGGCGAT TTTTCCGACC TACCGATCAA ACCATCTTGC TTGCCACTGA AGTGCCGATC AACGATGCAC AGGGTGGCGC GAGTGTCGTG CTCATCCGTA ACGTGACCCG TGCGGAGCAA CAGCAAGCCG AGCTGATCGC CTCGCGCGCA GCCCTCGCTG AACGCACCGC CGAACTCGAA CGTTCGTTGG CCGAATTACA ACAGCGTGAC GAGTTACTCC GCCGGTTGAG CCTACCGATC ATCCCGCTGA GCGCCACCAT GGTGGTCGTA CCGTTGATCG GTATATTCGA CGCGGCACGC TGTCAAAGCC TACTTCAACT CATACTACCG GAAATTGCCG AACGAAACGC AAAAATGGTA TTGGTCGATC TCACCGGATT AACGGCGTTT GACCAAACCC TCGCCCACAC GTTGTACCAA CTGCGCGATG GGGCGCATCT GATGGGGACG CAGATTTTCT TGTGTGGTAT CCGACCAGAT TTAGCCGAGG TGATGATCCA CGCCGGTGGG ATATGGAGCG GCCTGCGTTC GTTTGCTACG TTGCAAGACG GGGTGAAAGC GTTGCTAACA AACACGATAC TGTAA
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Protein sequence | MLLTCAGAVR FSSRNLDEIW LLSGLLTSLQ AVIFGFLIWL IMLLFMPHRY QQPWLRWAVF TPYLLMAVGL VIDWYGRFGF VGRDVVRETS GLLGFVRGPA FVPAFTLYII GCIVIPLIML ITIAIRQPAM RGPAVWLIIG TILTFLMGYI FREIGLVSVT YVSLLPLHLS FGWVTLRYGV FRPSQVALQA AVEHLPDGML VLDTQRQIRY ANRAAQRIIA GNDRNEQSFE QALAQAGFIE QTSTEDRERQ RRRFFRPTDQ TILLATEVPI NDAQGGASVV LIRNVTRAEQ QQAELIASRA ALAERTAELE RSLAELQQRD ELLRRLSLPI IPLSATMVVV PLIGIFDAAR CQSLLQLILP EIAERNAKMV LVDLTGLTAF DQTLAHTLYQ LRDGAHLMGT QIFLCGIRPD LAEVMIHAGG IWSGLRSFAT LQDGVKALLT NTIL
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