Gene Cagg_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1660 
Symbol 
ID7268962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2025775 
End bp2027427 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content60% 
IMG OID643566502 
Producturocanate hydratase 
Protein accessionYP_002462997 
Protein GI219848564 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGA TTATTCGTGC GCCGCGCGGC ACTACCCTCA CGTGTGCAAA TTGGCAGATC 
GAAGCGGCAT ACCGTATGAT CCAAAATAAC CTTGATCCCG ATGTCGCCTT CGATCCAGAG
CATTTGATCG TCTACGGTGG GCGGGGGCGT GCCGCCCGCA ATTGGGCGTG CTTCGACGCG
ATTCTGGCTA CGCTGCGCCG TCTTCAGCCT GACGAAACCC TGATCGTGCA ATCGGGTAAG
CCGGTTGCCG TCTTTCGTAC CCACCTCGAT GCACCACGGG TCTTGATTGC CAACGCTCAT
CTCGTGCCGG CATGGGCTAC GCAGGCCAAT TTTGACCGTT GGGAAGCGGC CGGGCTGACG
ATGTATGGGC AGATGACGGC AGGGAGTTGG ATTTATATCG GCACGCAAGG GATTTTGCAA
GGTACGTATG AGACGTTCGG CGCGCTGGCC CGCTCGGCCG GTTGGGGGAC GCTGCGTGGC
AAACTGGTGG TGACAGCCGG TCTTGGTGAG ATGGGTGGTG CGCAGCCGTT GGCCGTGACC
TTGAACGAGG GCGTGATTAT TGCCGTAGAG GTTGATCGTT GGCGGGCTGA ACGGCGTCTA
CGTCTCCGCC AGGTTGATCG CCTGAGCGAT GATCTCGAAG AAGCGATGAC GTGGGCCGAA
GAGGCGCGGG CAGCCGGTAC TCCCCTCTCA ATCGCGCTGA TCGGGAATGC GAGTGAGGTG
TTACCCGAAA TGCTTCGTCG TGGTGTAACG CCCGATGTCG CCACCGATCA GACAAGTGCC
CACGATGTGC GCTACGGTTA TATTCCGGCC GGTCTGTCAT TGGCAGAAGC GGCTGCGTTG
CGCGAGCGTG ATCCTGACGA ATACGATCGC CGGGTATTGG AGTCGATGGC TGAGCATGTA
CGCGTATTGC TTGAATGGCA ACGGCGTGGC TGCATCGTGT TCGATTATGG CAATAATCTG
CGTCAGCGTG CGTTCGATGC CGGCGTTAAG GATGCTTTTA GCTACCCCGG TTTCGTGCCG
GCCTATATCC GCCCTTTGTT TTGCGAAGGT AAAGGCCCGT TCCGCTGGGT GGCGCTCTCC
GGCGACCCCG AAGATATTTA CGTTACCGAT GGTGCAATCA GCGAGTTGTT CCCCGACAAT
GAGCATCTTG GTCGTTGGCT ACGGCTGGCC CGTGAATACG TCACGTTTCA AGGCTTACCG
GCTCGCATCT GTTGGCTTGG CTATGGTGAA CGAGCAAAGG CCGGTCTTCT GTTAAACGAT
CTTGTCGCCC GTGGAGCGGT GAAAGCACCG ATTGTCATCG GGCGCGACCA TCTCGATGCC
GGCTCGGTGG CGAGTCCCAA CCGGGAAACG GAAGGTATGC GTGATGGTTC TGATGCCATC
GCCGATTGGC CATTGCTCAA TGCCCTGCTC AATGCGGTTG GCGGCGCGAC GTGGGTCAGC
ATTCATCACG GTGGTGGCGT CGGTATCGGC TACAGCATCC ACGCCGGGCA AGTGATCGTT
GCCGATGGTA CCCCCGAAGC CGCGCGCCGG ATCGAGCGGG TGCTCACCAC CGATCCCGGT
ATGGGCGTTG TGCGCCACGC CGATGCCGGT TACCCAGAGG CGATTGCGTT TGCCCGCCGG
CACGGGATCG ATATGCCGAT GTTGGGGCAG TAG
 
Protein sequence
MSRIIRAPRG TTLTCANWQI EAAYRMIQNN LDPDVAFDPE HLIVYGGRGR AARNWACFDA 
ILATLRRLQP DETLIVQSGK PVAVFRTHLD APRVLIANAH LVPAWATQAN FDRWEAAGLT
MYGQMTAGSW IYIGTQGILQ GTYETFGALA RSAGWGTLRG KLVVTAGLGE MGGAQPLAVT
LNEGVIIAVE VDRWRAERRL RLRQVDRLSD DLEEAMTWAE EARAAGTPLS IALIGNASEV
LPEMLRRGVT PDVATDQTSA HDVRYGYIPA GLSLAEAAAL RERDPDEYDR RVLESMAEHV
RVLLEWQRRG CIVFDYGNNL RQRAFDAGVK DAFSYPGFVP AYIRPLFCEG KGPFRWVALS
GDPEDIYVTD GAISELFPDN EHLGRWLRLA REYVTFQGLP ARICWLGYGE RAKAGLLLND
LVARGAVKAP IVIGRDHLDA GSVASPNRET EGMRDGSDAI ADWPLLNALL NAVGGATWVS
IHHGGGVGIG YSIHAGQVIV ADGTPEAARR IERVLTTDPG MGVVRHADAG YPEAIAFARR
HGIDMPMLGQ