Gene Cagg_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1640 
Symbol 
ID7268941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1996988 
End bp1997902 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content55% 
IMG OID643566481 
Productphotosynthetic reaction center subunit M 
Protein accessionYP_002462977 
Protein GI219848544 
COG category 
COG ID 
TIGRFAM ID[TIGR01115] photosynthetic reaction center M subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.761486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TGGACATGAT GCCGGGCGAT CTGGAACTGG GGCGTGATCG CGGACGAATC 
GGTAAACCGA TTGAAATTCC GCTCCTCGAG AACTTTGGCT TCGATAGCCA ATTAGGCCCG
TTCTACCTCG GCTTCTGGAA TGCAGTTGCG TACATCAGCG GCGGTATTTT TACCTTCATC
TGGCTGTTTG TCATGCTGTC GCAGGTGAAC TTTAACCCGG TGGCGTTTAT CAAGTATTTT
GTCGTCCTGC AAATCGATCC GCCATCGTCA CGCTATGGAT TGAGCTTCCC GCCGCTGAAT
GAGGGTGGCT GGTGGCTGAT TGCTACCTTC TTCCTTACCC TGTCGATCTT CGCGTGGTAT
ATGCATATCT ATACTCGCGC GAAGGCGCTC GGTATTAAGC CCTATCTGGC TTACGGCTTC
ACCGGCGCAA TTGCGCTCTA CCTGGTGATC TATATTATCC GTCCGATCTG GATGGGTGAT
TGGTCGGAGG CTCCGGCCCA CGGGATTAAG GCGCTGCTCG ACTGGACGAA CAACGTGAGC
GTGCGTTACG GTAACTTCTA CTACAATCCG TTCCACATGC TCTCGATCTT CTTCCTGCTC
GGCTCAACCT TACTGTTGGC GATGCACGCC GGCACAATCT GGGCATTGGA GAAGTATGCG
GCCCACGAGG AGTGGAATGA GATTCAAGCT CCCGGTACCG GTACCGAGCG CGCTCAGCTC
TTCTGGCGCT GGTGCATAGG CTTCAATGCT AATGCGTACT CGATCCACCT GTGGGCGTTC
TGGTTTGCGT GGCTATGCGG AATTACCGGC GCACTCGGTG TCTTCTTCTC GATGCCTGAT
TTCGTCAATA ACTGGTTCCA GTGGGGTGTC GAGGCCGGGA TTGCGTATCC ACAAGGACCG
ACACCGCTAC CGTAG
 
Protein sequence
MATMDMMPGD LELGRDRGRI GKPIEIPLLE NFGFDSQLGP FYLGFWNAVA YISGGIFTFI 
WLFVMLSQVN FNPVAFIKYF VVLQIDPPSS RYGLSFPPLN EGGWWLIATF FLTLSIFAWY
MHIYTRAKAL GIKPYLAYGF TGAIALYLVI YIIRPIWMGD WSEAPAHGIK ALLDWTNNVS
VRYGNFYYNP FHMLSIFFLL GSTLLLAMHA GTIWALEKYA AHEEWNEIQA PGTGTERAQL
FWRWCIGFNA NAYSIHLWAF WFAWLCGITG ALGVFFSMPD FVNNWFQWGV EAGIAYPQGP
TPLP