Gene Cagg_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1625 
Symbol 
ID7268926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1983900 
End bp1984553 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content55% 
IMG OID643566466 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_002462962 
Protein GI219848529 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0575261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCG TTGTGCAAAT TGTGTTTGGG ATCATCGCCC TCTTCATTCT GGTTGCAGCA 
GTGATGGTTG TGTCAGTGCG GAATGTTATC CATTCGGCAC TGTGGCTGAT CGCTTGTTTT
TTTGGTGTCG GCGCACTGTA CATGCTGCTT CAAGCCGAAT TTTTGGCCGT TGTACAGGTA
TTGGTCTATG TCGGTGCCGT GTCGGTGCTG ATCCTCTTTG CGATCATGCT GACCCGCCAG
ATCAGTGGTG AAGGGGTGCG CCAACTTACG ACGCGCTGGC CGATTGTATT GGCGATCTCC
GTCTTACTCT TTGCGACGGT TATGGCGCCG ACTCTTATCA ACCAGCAGTG GAATGTGCCG
CCTGCACCGC CATTAGGGAC GCCTGAACCA ATTGCCGGAC CGGCTGAGTT GGGGCGTGGC
TTTGTCAATG AGTTTTTGCT CCAATTCCAG GTTGTCGGTG TGTTGTTGAC GGTAGCGCTG
ATCGGAGCCA TCGTGATCGC TTTTGAAGAG CGGGCGCGAC GGCGGCGTGT ACTAACGTTA
GCTGAAGAGT TGGAATTGAA GCGTTTGCGG GCGGGAGCTA CCCAACCACC GCTTCCCGAA
CCGGTTGAAG CTGAGCCGGT AGCACGCGAG ACACGTCCGG CGAATGAGGT GTGA
 
Protein sequence
MEVVVQIVFG IIALFILVAA VMVVSVRNVI HSALWLIACF FGVGALYMLL QAEFLAVVQV 
LVYVGAVSVL ILFAIMLTRQ ISGEGVRQLT TRWPIVLAIS VLLFATVMAP TLINQQWNVP
PAPPLGTPEP IAGPAELGRG FVNEFLLQFQ VVGVLLTVAL IGAIVIAFEE RARRRRVLTL
AEELELKRLR AGATQPPLPE PVEAEPVARE TRPANEV