Gene Cagg_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1621 
Symbol 
ID7268922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1978034 
End bp1979545 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content54% 
IMG OID643566462 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_002462958 
Protein GI219848525 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0965483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0205766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGA TAACGCTTGC CGCTGATGTG CCGTGGCTGA GCTTGATCTG GCTCAGTATG 
TTGATTCCGG CCGTCATTAT CGCTTTCATT CCAGACCGTT ACCCGGATGT GATGCGCATT
GTCGGGACCG GCTTTGCACT GCTTTCGCTG ATCTTGTCAC TGCTGGTCTT TTTGGCTTAC
GATCCGGTCA AAGGCGGCTT CCAGTTTGTT GAACAGCTCG ACTGGATTCC CCAGCTCGGT
ATAAGCTATT TGCTCGGCGC CGACGGGATT AGTTTGCCGA TGCTGTTGCT CAACGGTATC
GTTATTTTTA CCGGTGCGCT GATGAGTTGG AATATTGAAG AGCGCACTAA GGAGTATTGG
GTTTGGTTGT TGTTACTCAC TACCGGTGTG TATGGCGTGT TTAGTGCGCT CGACCTCTTT
CTCTTCTTTG TCTTCTACGA ATTGGCCGTC TTGCCGATGT ATTTGCTGAT CGGTATTTGG
GGCAGTACGC GCAAAGAATA CGGTGCGATG AAGCTGACCC TCTTTCTGAT GGCCGGTAGC
GCATTGGTTA TCATTGGTAT GATCGGCCTG TACTTCGGCA GCGGTTTGCG CACGTTTAAT
ATGCTGGTAC TGGCCGAACA GGGTTTCATT GCCGGTGATC TGCAACGGTT ACTCTTCCCG
GCACTGTTTA TCGGGTTTGG CGTGCTGGCC GGTATGTTCC CCTTTCATAC GTGGAGTCCG
ACCGGTCACG TGGCGGCACC GACGGCGGTG AGTATGTTGC ACGCCGGCGT GTTGATGAAG
CTCGGTGCGT ATGGTTGTCT GCGGGCGGCG ATGTGGTTGA TGCCGGTGGG TGCCCGTGAT
TGGTTGCCGA TTATCGTGAT CTTCACCATC TTTAACGTCG TGTACGGTGC CAGTATTGCG
ATGGTGCAGC GCGATGCTAA GTTTATCATT GGCTACTCGT CGGTAAGCCA TATGGGTCTG
GTGGTGATGG CGCTCGCTTC CGGTACGCAA ATTGCTCTGA TGGGTGCCGT CTTGCAGATG
TTTGCTCACG GAATTATGAC GGCGCTCTTC TTTGCGGTGG TGGGCCGGAT GATTTACGAC
CGTACCCATA CCCGCCAGTT GCCGGAGTTG GGTGGTTTGG GTCGGGTGAT GCCGTTTGCC
GTGACTATGT TCATTCTCGG TGGGCTTTCG TCGATGGGTA TGCCGGGATT GGCCGGTTTC
TGGGCCGAGT TCAATATTTT CATCGGAGTC TGGGAGCGGT ATCCGTTGGT AGCGGTGATC
GCTGCCCTGA GTATTCCGAT TACCGGGGCG TATATTCTAC GTGCGGTGTG GTCGGTTTTC
TACGATGAGG TTAAGAACCC GGAGTTTTTG CATCTGCCGA AGCTGACGTG GCAGGAGTAT
AGCGGTGCTC TGATCTTGGC TGTGGTGTTG GTGGGGTTGG GTTTGTACCC GTCGTGGATG
ACGGAGTTAA TCGATACGGC GGTGCGTCCG TTGGCTGCGC GGTTGAGTGA GGTGGCGGTG
GCATTCAGGT AG
 
Protein sequence
MGLITLAADV PWLSLIWLSM LIPAVIIAFI PDRYPDVMRI VGTGFALLSL ILSLLVFLAY 
DPVKGGFQFV EQLDWIPQLG ISYLLGADGI SLPMLLLNGI VIFTGALMSW NIEERTKEYW
VWLLLLTTGV YGVFSALDLF LFFVFYELAV LPMYLLIGIW GSTRKEYGAM KLTLFLMAGS
ALVIIGMIGL YFGSGLRTFN MLVLAEQGFI AGDLQRLLFP ALFIGFGVLA GMFPFHTWSP
TGHVAAPTAV SMLHAGVLMK LGAYGCLRAA MWLMPVGARD WLPIIVIFTI FNVVYGASIA
MVQRDAKFII GYSSVSHMGL VVMALASGTQ IALMGAVLQM FAHGIMTALF FAVVGRMIYD
RTHTRQLPEL GGLGRVMPFA VTMFILGGLS SMGMPGLAGF WAEFNIFIGV WERYPLVAVI
AALSIPITGA YILRAVWSVF YDEVKNPEFL HLPKLTWQEY SGALILAVVL VGLGLYPSWM
TELIDTAVRP LAARLSEVAV AFR