Gene Cagg_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1603 
Symbol 
ID7268169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1958765 
End bp1959076 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content57% 
IMG OID643566444 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_002462940 
Protein GI219848507 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.799719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTGA AGCTCTTTGT CGGCAATTTG GCTTGGAGTG TCGATGATGC AACCCTCGAG 
CAGTTCTTCC AAGCTTACGG TGATGTACGT AGCGCGCGGG TAATTAACGA TCGTGAGACC
GGTCGATCGC GTGGATTTGG CTTTGTCGAG ATGGACGTTA CCGACGTTGC GAAGGTCATT
AGCCAAACCA ACGGTCAGCC GATCAACGGG CGTGAGATTC GGGTCAACGA GGCGGAGGAT
AAGGGTTCGC GAGGCCCTCG TTCCGGCGGT GACCGCGGAG ATCGCGGCGG CTTCGGCGGT
CGGCGTTATT AA
 
Protein sequence
MYVKLFVGNL AWSVDDATLE QFFQAYGDVR SARVINDRET GRSRGFGFVE MDVTDVAKVI 
SQTNGQPING REIRVNEAED KGSRGPRSGG DRGDRGGFGG RRY