Gene Cagg_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1578 
Symbol 
ID7268144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1931747 
End bp1932529 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID643566420 
Productsuccinate dehydrogenase/fumarate reductase iron-sulfur subunit 
Protein accessionYP_002462916 
Protein GI219848483 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000198754 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CGCTCAAGAT CTGGCGACAA AAGAACCGTT CAACACCCGG CGAGTTTAAG 
ACGTATGTCA TGGATAATGT CAATCCCGAC ATGTCTTTCC TCGAAATGCT CGATGTACTG
AACGAGGAAT TGATCATGAA GGGTGAAGAG CCGGTTGCAT TTGATCACGA TTGTCGGGAA
GGTATCTGCG GCATGTGCTC GCTGATGATC AACGGCGTAG CCCATGGACC AAAGAACGCA
ATTACTACCT GCCAGTTACA TATGCGCAGC TTCAATGACG GTGACACAAT TACCGTTGAG
CCATGGCGCG CCTCTGCCTT CCCGATCATC AAAGACTTGG TTGTCGACCG CAGCGCGTTC
GACCGGATTA TCCAGGCTGG CGGCTATATC AGCGTGAGCA CTGGCTCAGC ACCAGATGCT
AATACTATCC CCGTCCCGAA GACTGCAGCC GACCGCGCAA TGGATGCCGC TGCCTGCATC
GGTTGTGGTG CTTGTGTCGC AGCGTGCCCC AACGGCTCGG CAATGCTCTT CACCGCTGCC
AAGGTTACGC ACCTCGCCCT ATTACCGCAG GGTCAACCTG AACGGTATCA GCGCGTGGTG
AATATGGTTG CTCAAGCTGA CTTCGAGGGG TTTGGGAATT GTACCAATAT CGGTGAATGC
GCCGCGGTCT GCCCCAAGGA GATTAGCCTC GAGACGATTG CCCAACTCAA CCGCGATTTA
GTGATGGCGG CGTTGCGCGG GATCGAACCC AATACACCAA TTGGTGCAGC AACCAGACGG
TGA
 
Protein sequence
MKITLKIWRQ KNRSTPGEFK TYVMDNVNPD MSFLEMLDVL NEELIMKGEE PVAFDHDCRE 
GICGMCSLMI NGVAHGPKNA ITTCQLHMRS FNDGDTITVE PWRASAFPII KDLVVDRSAF
DRIIQAGGYI SVSTGSAPDA NTIPVPKTAA DRAMDAAACI GCGACVAACP NGSAMLFTAA
KVTHLALLPQ GQPERYQRVV NMVAQADFEG FGNCTNIGEC AAVCPKEISL ETIAQLNRDL
VMAALRGIEP NTPIGAATRR