Gene Cagg_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1520 
Symbol 
ID7267297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1857167 
End bp1857946 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content55% 
IMG OID643566363 
Productcytochrome c oxidase subunit III 
Protein accessionYP_002462859 
Protein GI219848426 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.34828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACGA TCACACACGA AGAGGCGCAT GTACACACGC ACAGCCACGG CCCCGAACTG 
CAACATCAGT TCGAGACGCC GGAGCAGCAG AAAGAGGCTG CTACGTTAGG CATGTGGGCC
TTTCTCGTCA CCGAAATAAT GCTCTTCGGT GGTATCTTTA TGGCCTACAT CGTCTATCGC
TGGGCCTTCC CTGAGGCATG GGAAGAGGCG GCAGCGCTGC TCAACACTCC GTTAGCTGCC
GTCAATACGG TTGTTCTCCT GGTTAGTTCG TTGACGGTGG CGCTGGCCGT CAATGCTGCC
GAAGAGGGTA ATAAGCGGCG GTTGTTGACG ATGCTCGTGC TGACAATGTT GCTCGGCGTG
ACCTTCCTTG TAATCAAGGG GTATGAGTAC AGTGAGAAGT TTGCTCACTG CGCCGGCGCG
AAAGACCCGA TCAGTTGGAT TACCGGTAGT GACTTGCACG AGAGCCATGA ATGTTTGGTG
CCGGGGCGCG GGTTCATGTT TCCTGCCGAG CATGGTGCAG CGAGTGGCGG CCATGGCGCG
CCTGCAACCG GTCTAATGCA GTCCGGTCAC CAACTATTCT TCTTCTTGTA CTTCTGCGCA
ACCGGCTTGC ACGCGATCCA CATGCTTATC GGCTTGGGGG TGATGGGTAC CATCACGACG
ATGGCCTTGC GTAACAAGTT CTCACCGACA TACTATACGC CGGTTGAGAT CGGTGGTTTG
TATTGGCACC TGATCGATAT TATTTGGGTT TTCCTCTTCC CACTTTTCTA TCTGGTTTAG
 
Protein sequence
MATITHEEAH VHTHSHGPEL QHQFETPEQQ KEAATLGMWA FLVTEIMLFG GIFMAYIVYR 
WAFPEAWEEA AALLNTPLAA VNTVVLLVSS LTVALAVNAA EEGNKRRLLT MLVLTMLLGV
TFLVIKGYEY SEKFAHCAGA KDPISWITGS DLHESHECLV PGRGFMFPAE HGAASGGHGA
PATGLMQSGH QLFFFLYFCA TGLHAIHMLI GLGVMGTITT MALRNKFSPT YYTPVEIGGL
YWHLIDIIWV FLFPLFYLV