Gene Cagg_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1481 
Symbol 
ID7269318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1814761 
End bp1815522 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content60% 
IMG OID643566326 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462822 
Protein GI219848389 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.196322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.805943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG CAATCCTAAC CGGCGCCTCC CAAGGGATTG GGTTTGCCGT CGCGCGTCGG 
ATGGCACAAG AGGGATATAC CCTCATCATC AATAGCCGTA CTCCAGAGCG AGCTGTAGCG
CTGCTCCAAT CTGAAGTGCC TACCGCTCAG ATCGTTGCGG TGGCCGGTGA TCTGGCGGCA
GAGATGACAA CGACCCGTCT GATCGAAACG GCGCAGCAAT TTGGTCGGCT CGATGCGTTG
TTGCTCAACT ATGGCGGCCC GCCGGTCAAA CCCTTGGCCG AGATCGATGA TGAAGAGTGG
CGACGTTCGT TTGATGTCAT GGTGGTCGCC CCGCTCCGCC TCCTGCGCTG CGCCTTGCCG
CTCTTTCGCC AGAGCGGTGG TGGGCGTGTG GTGGCGATCT CCTCCTTTAC CGTCAAAAGT
CCGCATCCCG GTATTGCCCT CTCGAATGCC TTACGCGCTG CATTGGTTAA CGCACTCAAA
ACGGCAGCGC TCGAGTTGGG GCCAGAGGGG ATTTTGGTCA ACGCCGTCGC ACCCGGCTAC
ATTCTCACCG AACGCATCCA GGATTGGAAC CAGAGCTACG CCGCGCGTGA GGGGGTCTCG
CCCGCCGATA TTGCCCAACG CACGACCACA GGGATCCCGC TGCGTCGCTA TGGCACGCCG
GCGGAGATTG CCGAAGCCAT TGCCTTCTTG CTCTCGCCAC GCAATGGCTA TATCACCGGT
CAGCAACTGT TGGTCGACGG TGGTCTCATT GTTGCGGCAT AA
 
Protein sequence
MSVAILTGAS QGIGFAVARR MAQEGYTLII NSRTPERAVA LLQSEVPTAQ IVAVAGDLAA 
EMTTTRLIET AQQFGRLDAL LLNYGGPPVK PLAEIDDEEW RRSFDVMVVA PLRLLRCALP
LFRQSGGGRV VAISSFTVKS PHPGIALSNA LRAALVNALK TAALELGPEG ILVNAVAPGY
ILTERIQDWN QSYAAREGVS PADIAQRTTT GIPLRRYGTP AEIAEAIAFL LSPRNGYITG
QQLLVDGGLI VAA