Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1481 |
Symbol | |
ID | 7269318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1814761 |
End bp | 1815522 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643566326 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002462822 |
Protein GI | 219848389 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.196322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.805943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG CAATCCTAAC CGGCGCCTCC CAAGGGATTG GGTTTGCCGT CGCGCGTCGG ATGGCACAAG AGGGATATAC CCTCATCATC AATAGCCGTA CTCCAGAGCG AGCTGTAGCG CTGCTCCAAT CTGAAGTGCC TACCGCTCAG ATCGTTGCGG TGGCCGGTGA TCTGGCGGCA GAGATGACAA CGACCCGTCT GATCGAAACG GCGCAGCAAT TTGGTCGGCT CGATGCGTTG TTGCTCAACT ATGGCGGCCC GCCGGTCAAA CCCTTGGCCG AGATCGATGA TGAAGAGTGG CGACGTTCGT TTGATGTCAT GGTGGTCGCC CCGCTCCGCC TCCTGCGCTG CGCCTTGCCG CTCTTTCGCC AGAGCGGTGG TGGGCGTGTG GTGGCGATCT CCTCCTTTAC CGTCAAAAGT CCGCATCCCG GTATTGCCCT CTCGAATGCC TTACGCGCTG CATTGGTTAA CGCACTCAAA ACGGCAGCGC TCGAGTTGGG GCCAGAGGGG ATTTTGGTCA ACGCCGTCGC ACCCGGCTAC ATTCTCACCG AACGCATCCA GGATTGGAAC CAGAGCTACG CCGCGCGTGA GGGGGTCTCG CCCGCCGATA TTGCCCAACG CACGACCACA GGGATCCCGC TGCGTCGCTA TGGCACGCCG GCGGAGATTG CCGAAGCCAT TGCCTTCTTG CTCTCGCCAC GCAATGGCTA TATCACCGGT CAGCAACTGT TGGTCGACGG TGGTCTCATT GTTGCGGCAT AA
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Protein sequence | MSVAILTGAS QGIGFAVARR MAQEGYTLII NSRTPERAVA LLQSEVPTAQ IVAVAGDLAA EMTTTRLIET AQQFGRLDAL LLNYGGPPVK PLAEIDDEEW RRSFDVMVVA PLRLLRCALP LFRQSGGGRV VAISSFTVKS PHPGIALSNA LRAALVNALK TAALELGPEG ILVNAVAPGY ILTERIQDWN QSYAAREGVS PADIAQRTTT GIPLRRYGTP AEIAEAIAFL LSPRNGYITG QQLLVDGGLI VAA
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