Gene Cagg_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1411 
Symbol 
ID7269243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1737938 
End bp1738897 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID643566254 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002462754 
Protein GI219848321 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAT ATATCATTCG ACGATTGTTA ATTGCGATTC CCACCCTCTT AATTATCAGT 
TTTGTGATCT TTGCTGTCCT TGCACTTGCC CCCGGCGATC CACTAGCCCA ATTTGCCCTT
AATCCCGCCA TTCCCGAATC GACCCGTGAG TTGATCCGCA TCCAGTTTGG CCTTGATCAA
CCATGGCCGG TACGCTACGT GCGTTGGCTG ACCTCACTGC TTCGTGGCGA TTGGGGGTTC
TCGTTTGGGA CACGTGGCCC GGTGATTGAC CTGATCTGGC AACGTTTACC ACAAACCTTA
ACCGTGGTTG GATCGGCGTA TCTCATTGCC GTAATGTTGG CAATCCCGAT TGGTATTATC
TCAGCGGTGA AACAATATTC GCTTTTTGAT AATATAGCTA CATTTTTCGC CTTTATTGGG
TTTTCAGTAC CTTCATTCTT TACCGGTCTA GTATTGATCT TGGTATTTGC GATTAATTTA
AAATGGTTTC CTATTGTTTA CAATACGACA TTACAAGTTG TTGATTGGGA TACCTTCACC
CAACAGGTAC GACAGATGGT GCTACCGGTG ACCGTGTTGG TTGTCCAGCA AACAGCAGCT
CTCACCCGTT TTATGCGCTC GTCGATGCTC GATAATTTGA CGCTCGATTA TGTGCGCACA
GCGCGTGCGA AAGGCCTCAG TGACCGGATG GTAGTACTGC GTCATGTGCT GGTCAATAGT
CTGATCCCAG TAGTGACGTT GATTGCGCTC GGTATTCCAA CAATCTTCGC CGGTGCGATC
ATTACCGAGA ATCTGTTCCG GGTTAACGGT CTTGGGGCAC TACTGATTAC ATCAATCAAC
AATTCCGATA CACCGGTTGT AATGGCTTTG ACTTTTATCT TTGCGATCCT TACCGTTATC
TTTAATCTGA TCGCCGATAT TCTGTACGGC GTGCTCGATC CGCGTGTCCG CTATTCATAA
 
Protein sequence
MLQYIIRRLL IAIPTLLIIS FVIFAVLALA PGDPLAQFAL NPAIPESTRE LIRIQFGLDQ 
PWPVRYVRWL TSLLRGDWGF SFGTRGPVID LIWQRLPQTL TVVGSAYLIA VMLAIPIGII
SAVKQYSLFD NIATFFAFIG FSVPSFFTGL VLILVFAINL KWFPIVYNTT LQVVDWDTFT
QQVRQMVLPV TVLVVQQTAA LTRFMRSSML DNLTLDYVRT ARAKGLSDRM VVLRHVLVNS
LIPVVTLIAL GIPTIFAGAI ITENLFRVNG LGALLITSIN NSDTPVVMAL TFIFAILTVI
FNLIADILYG VLDPRVRYS