Gene Cagg_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1393 
Symbol 
ID7267245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1718431 
End bp1719486 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content59% 
IMG OID643566236 
ProductTPR repeat-containing protein 
Protein accessionYP_002462736 
Protein GI219848303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.700951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CCGCAGGCGA ACCCGGAGTA CGGGCCAATC CAACCGAAGC ACGTGAACTT 
GTTGAGCGCG GCATTGCGGC AGCCCGCGGC GGGCAACGTC GCGTCGCAGC CGGCCTCTTA
GCCCGCGCCC TCAAGCTCGA CCCACGCGAC GAACGGGCAT GGTTGTGGTT GAGCGAAGTT
GTTGACGATC CAGAACAACG TGCGTTTTGC TTGCACGCCG TTTTACGGAT CAATCCTCAC
AATCCGCACG CCCACCGCGG TCTGGCCTAC CTTGCCCGCC AAGGGACAAC AACTGCGCGT
CAGATAGCAG ACCTTACCGC TCCTACAGCC GAATCGACGC CGCTAACAAC TCCTACAGAG
CAGGCTCCCG CCTCACCGAA TCGCGACTGG TGGTTACAAT GGCGCTGGCA GCGCTATGAA
ACCTCGCGCG TGCGTGTAGT GCTCTGGCTA CTGCCAATCG TCTTGCTGAC AGTCGCCCTC
TTGCTCCACC AGAGCGTCCG CGCAGCACGC GAGCAAGCTC TCGCCGCCCT CGCCGCCGAA
CAGGAGCAAA CCTTTGCCAT CACAAACGAC CCGGTACTGC CACTCGCCAC CCCCACGCCT
GTCCCTGAAC TTGAGGCCGA ACCACTCGCT GTAGTCGAGA GTCTAACGGT ATCGTATCTG
ACTGCCATCG ACACAATTCG CGCCGAACTG CGGAAAGCGA CCGACACCTA CCGCCAAGAG
ACAGGACAGC CCGGTGGCGC TTCGATCAAC CATGTGGCTG CAACACAACG TCTGCGCGCC
GCGGTGGCGC AAGCGTTAGC CGATCTCGGT GAACTACGAG TACCGGGTGT GCTAACCCCA
GCTCACGAAG ATTACCGACG TGGTCTCGAA CTCGAACTAG CCGGTCTCGA CGCTATTCTT
GAGTTCTATA GCACGTATGA TGTTGCCAAT GCCAATCGGG CTGCGCTTCG TTTACAAGAG
GCACGCGCAT TTATCGAGCG GGCACAGGCG AGTTTTCAAA ACCAAAGCCA AATACTCGGC
GAGAGGAGCA TAGTTAGTGC CTACACCATT CGCTAA
 
Protein sequence
MTTTAGEPGV RANPTEAREL VERGIAAARG GQRRVAAGLL ARALKLDPRD ERAWLWLSEV 
VDDPEQRAFC LHAVLRINPH NPHAHRGLAY LARQGTTTAR QIADLTAPTA ESTPLTTPTE
QAPASPNRDW WLQWRWQRYE TSRVRVVLWL LPIVLLTVAL LLHQSVRAAR EQALAALAAE
QEQTFAITND PVLPLATPTP VPELEAEPLA VVESLTVSYL TAIDTIRAEL RKATDTYRQE
TGQPGGASIN HVAATQRLRA AVAQALADLG ELRVPGVLTP AHEDYRRGLE LELAGLDAIL
EFYSTYDVAN ANRAALRLQE ARAFIERAQA SFQNQSQILG ERSIVSAYTI R