Gene Cagg_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1380 
Symbol 
ID7267232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1707386 
End bp1708513 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content58% 
IMG OID643566223 
Productglycosyl transferase group 1 
Protein accessionYP_002462723 
Protein GI219848290 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCGC TTCGCATTGG CTTCGATGCC CGCTACGCTC GCGACCATTT TCCCGGCATT 
GGTCGCTACA TTACCGCTCT CTTACCGGCA CTCAGCCGGC ATTGTCGCTC CCATCACCTG
TTCGTCTTCA CTAATGCCGA CCAATCGCTG CCTTCGCTTC CCGCCGATGT GGTCGAGTTG
GTCCCGGTAC GGAGTGGCCC TTTTGCACTC AGCCAACAAA TTGAGCTACC CCTTATTGCC
CGGCGGTTGC GTCTCGATGT GTTCCATTCG CCGTATCTCG TTAAGCCGTA TCTGCTCCCC
TGCCCATCGG TTGTCACGAT CTACGACGTT GTGCCATTGC GTTACCCACA AACGCTCAGC
CCACGCGGAC GACGTTTTTA TCGCGTAAGC TTACGTCTCG CCGCACAAAG CGCTCGTAAA
CTGATTACGA TCTCGTCCGT CTCGCGCGAT GATCTTGCGT TCCACCTGCG CATCCCACGC
CAACAGATCG CCGTAACGCC GCTGGCCGCT GCACCATTGT TTGTCCCACA ACCGGTTGAT
GAGATTACTG AAGTGCGCTT ACGCTACGGT TTACCACGAC ATTACGTGTT GTATGTTGGC
TCGAATAAAC CACACAAAAA CATCGACCGC CTCCTGCGCT CATGGCAGCG CGTGCTCCCG
GCCTTACCAG AACAGTATGC CAACACCATA CTGGTCATAG CCGGGAAGTT TGACCCCCGC
TATCCGTTGC CGACTGCGCT TGCCGCCGAA CACGGCGTGG CCGACCAGGT GAAGGTCTTG
CCGAATGTCG CCGACACCGA TCTACCTGCA CTCTACAGCG GTGCCTTACT TTTCGTCTTT
CCTTCGTCGT ATGAGGGATT TGGTCTTCCA CCACTCGAAG CGATGTCCTG CGGCACACCG
GTGGTTTGTG CCTACGCCGG CAGTTTACCC GAAGTGGTTG ATGACGCCGC ATTGACGGTT
GACCCACACA ACATGCACGA CATCGCCGAG GGCATCTTGC GCGTCCTCCG TTCGCCCGCA
CTCCGTGACG TGCTCCGGAG TCGAGGATTA CGGCAAGCAG CACGTTTTTC GTGGCAAGCA
ACTGCTCAAG CTACCCTTGC CGTTTACGAG GAGGCGGTGC AGCGCTGA
 
Protein sequence
MLPLRIGFDA RYARDHFPGI GRYITALLPA LSRHCRSHHL FVFTNADQSL PSLPADVVEL 
VPVRSGPFAL SQQIELPLIA RRLRLDVFHS PYLVKPYLLP CPSVVTIYDV VPLRYPQTLS
PRGRRFYRVS LRLAAQSARK LITISSVSRD DLAFHLRIPR QQIAVTPLAA APLFVPQPVD
EITEVRLRYG LPRHYVLYVG SNKPHKNIDR LLRSWQRVLP ALPEQYANTI LVIAGKFDPR
YPLPTALAAE HGVADQVKVL PNVADTDLPA LYSGALLFVF PSSYEGFGLP PLEAMSCGTP
VVCAYAGSLP EVVDDAALTV DPHNMHDIAE GILRVLRSPA LRDVLRSRGL RQAARFSWQA
TAQATLAVYE EAVQR