| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1358 |
|---|
| Symbol | |
|---|
| ID | 7268650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1683099 |
|---|
| End bp | 1683638 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643566201 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002462701 |
|---|
| Protein GI | 219848268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000315647 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000356135 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCTC CACTAAAGCG TGATTGGTTT CTCGTTACAT TAATCATAGC CGGTATCAGT
TGGATTATCA TCAGTCGCCC GCCGGATATC CAACCACCAA CCATCAGCCC TCGCCCCGGT
TTTATTGCCC CGACTATTGC TTTACCACAG GCTAACGATC AAACCATTGT CTTGGCCGAG
CTGCAAGGTC GTGTTGTGGT TGTTAATTTC TGGGCCAGTT GGTGCGGGCC ATGCCGTGCG
GAAATGCCAA CGCTTGAACG TCTCTATCAG GCAGAACAGG ATCGTGGCTT GATCGTGCTC
GCCGTCAATC AGACCATGCA AGATAGCGAA ACGGCGGTTA TGGCGATGCA ACGCGAGCTA
GGGCTGAGTT TTCCGATCGT CTTCGACCGT GACGGTACAA CCGCCGAACG ATACGGCATT
CGGATGTTGC CAACAACGTT TATTATTGAC CGAGCCGGCG TTATTCGTCA CGTGTTCTTC
GGTGGACCGT TAAGCGAAGC ACACTTACGC AGCGTGATCG AACCACTCCT CACCGAATAG
|
|---|
| Protein sequence | MRSPLKRDWF LVTLIIAGIS WIIISRPPDI QPPTISPRPG FIAPTIALPQ ANDQTIVLAE
LQGRVVVVNF WASWCGPCRA EMPTLERLYQ AEQDRGLIVL AVNQTMQDSE TAVMAMQREL
GLSFPIVFDR DGTTAERYGI RMLPTTFIID RAGVIRHVFF GGPLSEAHLR SVIEPLLTE
|
|---|
| |