Gene Cagg_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1316 
Symbol 
ID7268607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1622555 
End bp1624846 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content45% 
IMG OID643566159 
Producthypothetical protein 
Protein accessionYP_002462660 
Protein GI219848227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.208096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000343046 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTACAA CATTGCAGCC GACTCAAGTT TATATTCCAT CTGCCCTATT TATCAGACCT 
ACTCTTGTCA TCGGTCTCGG CGGCACTGGA GTCGATGTCA TCCGGCAGCT CAAACGTCGC
ATCCGTCAGT CAATGCAACC GATGCCGGGT GTGTTAGAGT TCCTCGTCGT TGATACAGAG
ATGCCCCAGA ATATGCCCGG TGAAGAACGA ATTCTTGACC GTGAGATTGC CTATATTGGT
GACTTCAATG CGGGGAAGGT ACTGGATCAT CTAGATCAGC ATCCGCATAT CAAGGATTGG
TGGCCAAATG GTCAAGTAGT GACAGGATCA ATCTTCCGTG GCGCACGTCA GCGTCGATTA
GTCGGTCGCT TGTCGTTGTA TGCTCGTTGG GGACAGTTTG CTCACCGTCT TGATACCAAG
CTTGACAAGA TTCGGCAAAT TGCCGAGAAT GAGCAGGTAG AGAAGCAAGG AATCCGCACC
GAACGCACAG GTCAAGTGCG AGTGTATATT GTGTCATCGC TCTGCGGCGG TACCGGTTCG
GGTTTGCTGC TCGATGTAGC GTTTCGGGTT CGCAGTAAGC TAGGTGACGA TGGCGAAATT
TGTGGTGTTT TTGTTATGCC ATCGGTATTT TTACAAGAGA TTGCCAGCTA TGTTCAACGT
TTACGCATTC AAGGCAATGC CTATGCAGCA CTGAAAGAAC TGAATTACTA TCTGAGCGGT
CAGCAGCAAT TTGAAGCTAC CTTTCCAGAC TATGCCTACC AGACTCCGGA TGGCGCTAAA
CAGGTGATGT ATGTACGTCG ACCCTTCGAC ACAGTCTTTC TTGTTGATCG CGACAATGGT
AGTGAAGGGT TGAGCAGTAT TGATGAAGTC AAGCAAATGA TTGGTCAAGT TATCTACCTT
GATACGGTCA CTCCAATTGG TCGTGAGGCG GCTAGCAAGC GTGAGAATCT GAACGATCTT
GCTAGCGAGC AGCAGAACAA GTTTGCTTTG GCTATTGCTG GGGTTTCAAC GGCGTCACTT
GTGCTTCCGG TTCGTCCAGT ACAAGTGCAT GTTGAGATGA TGGGAATGCG AATCTTGCAA
GAGCATATTT TGCAAGAACA AAACAGTACT GTTAAGGATT CGTTAAAAAA CATTCAAGAA
TCAATAAATA AGTGGTTGCA AGAAGAATTA ACAGATGAAA ATGTTGAAAA ACTCTACAAA
GAGCTGCAAC AAAAGCTGAA AGATTTATAT ACAGAGAAAG GTCTTGACCA TGTTGCATCT
GTTATTTCAG AAATTCAATT AGAGCCGGAT GACCCGGATG ACTTTTGGTT AAATAGATTT
AAACGAAAAA TTTTTGGTAA AAACCATGTA AGCGAATCAC CGGTAGATGC AGTGATCAAT
CATATCAGAA AAAACATCGC TTCGATAAAA AATGTGAGCG ATTTTGTAAG GAAGTTAAGG
TTTTATTATG AGGATTGGCA TGCTATGATG CAGCAACAAT TATCTAACGT TGTTCCTTCT
CGTCCGCAAT CAATGTCAGA ACCAAAATCG CCGCAGAACA ATCTGAGTCT CTTTGAGTTG
GTAACAGAGT TGGGTTACGA ACGCGAGGTA CCTGCACCGG GTAATTTGCC GAATGCACAA
TGGCCAATTG ATCGATTTGT CTTTTCTTTA GCATCACTGT CAGGTGATAA CAGAGCTAAA
CTGATTAATG AGGTTGGCCT GCATGCAGTC TTTAACCTCG TTTACAAGTT TGAGAAGGGT
GAACATAAGC TGTTTCTTGA TCATCCACCT AATCATGATC CGGTTAAGGC CTATCTAGAG
ACCGTTCAAG GCTTTGTTAA CCCGATGCTT AGTGAGAGTT GGACTGCCAT TCGTTATCTT
CGGTGGTTCT ACAACAATAT TCAATACTAT AGCAATACAA GCACTGAATC GAGAGGATCA
CCCATTGATC CACTGCGACA TCTGAAGCTA CGCTCCGAAA AGCCTTTCCT ACGTATTGAC
AATGCTCGTT TGGGAACTGA GCACGCGAGT GATATTGAAG TACAACGTCT GATTGGATAC
AGTCCTTTAC TTACCTCGGC GGAAAGGCAC GATCCTGATA GTGTACTTTC TGATTTTGAT
AGCTACTACC ATGTAGATAC CGGAACCCCT AATCGAATAG ATGTGCTGGT TATTAGCTTT
GGTTATCGAA TCGCCGATCT TCGCGACCTG CCTGAATTGA AAAAGGCATA TGAGTATTTC
ATGAAGACCC AGAAGGAAAC GCTTCATATT CATAAGAACT GGAGCGATGG CCGGTTGCCG
GATTTGGTGT AG
 
Protein sequence
MTTTLQPTQV YIPSALFIRP TLVIGLGGTG VDVIRQLKRR IRQSMQPMPG VLEFLVVDTE 
MPQNMPGEER ILDREIAYIG DFNAGKVLDH LDQHPHIKDW WPNGQVVTGS IFRGARQRRL
VGRLSLYARW GQFAHRLDTK LDKIRQIAEN EQVEKQGIRT ERTGQVRVYI VSSLCGGTGS
GLLLDVAFRV RSKLGDDGEI CGVFVMPSVF LQEIASYVQR LRIQGNAYAA LKELNYYLSG
QQQFEATFPD YAYQTPDGAK QVMYVRRPFD TVFLVDRDNG SEGLSSIDEV KQMIGQVIYL
DTVTPIGREA ASKRENLNDL ASEQQNKFAL AIAGVSTASL VLPVRPVQVH VEMMGMRILQ
EHILQEQNST VKDSLKNIQE SINKWLQEEL TDENVEKLYK ELQQKLKDLY TEKGLDHVAS
VISEIQLEPD DPDDFWLNRF KRKIFGKNHV SESPVDAVIN HIRKNIASIK NVSDFVRKLR
FYYEDWHAMM QQQLSNVVPS RPQSMSEPKS PQNNLSLFEL VTELGYEREV PAPGNLPNAQ
WPIDRFVFSL ASLSGDNRAK LINEVGLHAV FNLVYKFEKG EHKLFLDHPP NHDPVKAYLE
TVQGFVNPML SESWTAIRYL RWFYNNIQYY SNTSTESRGS PIDPLRHLKL RSEKPFLRID
NARLGTEHAS DIEVQRLIGY SPLLTSAERH DPDSVLSDFD SYYHVDTGTP NRIDVLVISF
GYRIADLRDL PELKKAYEYF MKTQKETLHI HKNWSDGRLP DLV