Gene Cagg_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1312 
Symbol 
ID7268603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1614918 
End bp1617653 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content42% 
IMG OID643566155 
Productprotein of unknown function DUF87 
Protein accessionYP_002462656 
Protein GI219848223 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00374873 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000332559 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAACATG GGTTCGATCA GACTTTTTGG GAACCGAAAA ATAACAAATT TTGGGAACCG 
AAAAATAACG AATTTATAAC ACCACGCGCG ATTTTTGGAG CAGAGGTCGA TGGGTTGCCT
GATTTCTGGG ATGAAGGATT GTCGTTAGAG GAGCAAAACC AGTTGATGCA GAAAGTGATT
GAGCGACAGA AAACATTTGT GCATGCACTT AGTTTTTTGC GAGGTACCGC GCAATTCGAA
TTGCGTATGG TCTGCGACCC GCACGCACCG CAGCGTTTAC GGCTATTTTA CCTTGTAAGT
GTTGAAAACG CTGGTGATCC GGAACTAGTC TGGCGACAAT TTCATAACGC CTTTCCGTAT
GATCTCGACT TTCGCTTGCG TATGCTTACA CGTGAAGAGG TGCAGCAGAT TTGTGAACAG
CCGTTTCGGG AGCCAATGAG TTTGACATAC TATGAATGGG TTCAAAGCCC GTTTCTAGTT
ACGTTAGGCG CTGAAATTGC AAATTGCTGG GTGGCACCTG AATTGAGTAC AGACGGCTCG
CACACTTTAC TACGAACACT TCTCCAACAG GCTTGTCCCA TTATGATTGG ATTTACTGTT
GCCCCTATCG AAGTCGATGA GAATGTGACC AATGTTCTAG AAAACTGGCA GAAACTATTA
GAAAGAGTTG AAATAAATCT CTCAATAACT GTGAACGGTT TACGGGATGA TGACCCTCGA
AAGATTTTGG TAGACATTCT CAAAGATAAG TTATATCCTA TGAATAAGCC ATTGCTAGAT
TATTGGCTTT ATTTGATAAA TGAGGGAAGT AAGACACCAA AATTTCAACT TGAAATAGTA
AAGAATGCTG CGCAGCGTAT AATTCAGTCG AAAGATTCTT TGTTCCGCTG GCGAGTGCAT
GCGGCTGTGC CGAGTGATCG GACTATTGAT CCGGTCATTG ATCGCGCTGT TACCGATAGG
TTGCGTCCGC GCAGTGCTGG CATAGTTAGC TATCAATGTT ACCGGTGCGA GGTAGATATT
GATAAATTGC CGGTCAATAA TGTGCGATTC ATTCGTCTTG ATACACCTGA ACGATCTGAT
GATGACCCTG CGCGTCTGAT TATTGATGAT ATTGGTGCCG CAGCATTGTT GCAATTGCCA
ATCTTGCCAC CAGGTGGGAT TCCCGGTGTT AGATCATTTC CGGCTAACCC TTTCACTTCG
TGGCAGCTTG AAGAAGAAGA TGCTGCTCAT AATAGTATCA AGTATATCAA GATTGGAGAG
TATATCGACA GTCGAATTGG TTTGTTGGAC AAATCACGAG TTGCTTCTAT CTCGCTCGAT
GATTTAACGA GGCATGTTTT GATAACCGGC TCGACCGGTA GTGGTAAATC AACTACAAGT
AAACGGCTTA TCACTGAGCT ACACAGGCAT AAAGTACCGT ATTTGGTTAT TGAACCGGTA
AAATCTGAAT ATGGTGATTT GGCTTTTGCC GATGAAATAG CTGATCCTCC CTATCCTGAC
TTCTTTGTAC CGGGGAGATT TGATGACCCA ATCTGGTTTA ATCCATTCTA CATCCGAAAG
GGGGTTAGCC TAAACACTCA TCTTAGTTAC CTTACCTCGT GTTTCGAAGC AGCTTTTCCT
CTCAGTGATG TGCAAAGCAT GCTGCTAAAA GAAGTTCTGT ATGAAGCTTA TCGAGAGAAG
TTCGCAGAAA AGTCGTTCTT TATTAGTGAC TCTGTACCAA TAGAGCAGGA TTTAGCTGAT
GAAGATGTGC CTTCGCTTGA TGATCTTGTG AAAGCTAAAG AAACGATTGA TAAATTTGGA
TATAAAGGTG AACTTAAAAG CAATTTAAAA GCAGCAATTG AGTTACGTTT GCAACATCTC
CAAAAGGGGA TTATAGGTAG TATTTTGCAG CCTCGGAATA AGGGATTTCC TTCTTTTGAG
AATAGATTAA AGGATATTCT GCAAAAGCCA ACAATCATTC AGCTCAATCA AATTGGCAAC
AAAGAAGAGA AAGCACTGAT CATGGCTTTT ATCTTAATGG CAATGTATGA ATATTATGAA
CAGCAAACGA ATAGTGAATC ACTTCGCCAC GTAACGTTAA TCGAAGAAGC ACACGTATTA
CTGGAAAATG TAACACGAGA GAGCAAGGAA GGTTCAGCTA ATACGCGTGG TAAGGCCATT
GAATTGTTTG CTGATATGTT GGCTGAAATT CGTTCACGTG GTGAAGGGTT AGTGATTGTT
GAGCAGCTGC CATCAAAGCT TATCCCAGAA GCAATTAAAA ATACGAATCT CAAAATCATG
CACCGTCTTA CTGCGCGTGA GGACCGTGAC ATTCTTGGAG CAGCCATGAA TTTCAATGAG
CGGCAAAGTC GATTTGCCAC TACGCTACAG CGTGGTCAGG CCATCGTTTT TCGTGAGGGT
CTAAGTCAAC CAGCATTGAT TCGGGTGATA CCGATTAAGT TGCAGAGTGA TATACGAAGT
GAAGTGGATG AAGTTTTTTT GAGCATGGGA AGGTTTGAAC AAAAAGAGAG AGGTAGAGTA
GTGTCAGGGT TCAAGTTTCC ACCAGAACTA TTTGACTGTC TACAGCAAGT GTCAGATGGA
AAGAAGAATT TAGAACAACT TTTTGATATA ACTGGTAAAT ATCTTTCGAA CAAATCCAAT
AAAAAAATAA AGCCTGATGA TAGAAGAGCT ATTAAATGGT TCCTTTACCG GTTGACTCGA
CCATATCCAA AATACTTTAA ATTAATCTTT GGTTAG
 
Protein sequence
MQHGFDQTFW EPKNNKFWEP KNNEFITPRA IFGAEVDGLP DFWDEGLSLE EQNQLMQKVI 
ERQKTFVHAL SFLRGTAQFE LRMVCDPHAP QRLRLFYLVS VENAGDPELV WRQFHNAFPY
DLDFRLRMLT REEVQQICEQ PFREPMSLTY YEWVQSPFLV TLGAEIANCW VAPELSTDGS
HTLLRTLLQQ ACPIMIGFTV APIEVDENVT NVLENWQKLL ERVEINLSIT VNGLRDDDPR
KILVDILKDK LYPMNKPLLD YWLYLINEGS KTPKFQLEIV KNAAQRIIQS KDSLFRWRVH
AAVPSDRTID PVIDRAVTDR LRPRSAGIVS YQCYRCEVDI DKLPVNNVRF IRLDTPERSD
DDPARLIIDD IGAAALLQLP ILPPGGIPGV RSFPANPFTS WQLEEEDAAH NSIKYIKIGE
YIDSRIGLLD KSRVASISLD DLTRHVLITG STGSGKSTTS KRLITELHRH KVPYLVIEPV
KSEYGDLAFA DEIADPPYPD FFVPGRFDDP IWFNPFYIRK GVSLNTHLSY LTSCFEAAFP
LSDVQSMLLK EVLYEAYREK FAEKSFFISD SVPIEQDLAD EDVPSLDDLV KAKETIDKFG
YKGELKSNLK AAIELRLQHL QKGIIGSILQ PRNKGFPSFE NRLKDILQKP TIIQLNQIGN
KEEKALIMAF ILMAMYEYYE QQTNSESLRH VTLIEEAHVL LENVTRESKE GSANTRGKAI
ELFADMLAEI RSRGEGLVIV EQLPSKLIPE AIKNTNLKIM HRLTAREDRD ILGAAMNFNE
RQSRFATTLQ RGQAIVFREG LSQPALIRVI PIKLQSDIRS EVDEVFLSMG RFEQKERGRV
VSGFKFPPEL FDCLQQVSDG KKNLEQLFDI TGKYLSNKSN KKIKPDDRRA IKWFLYRLTR
PYPKYFKLIF G