Gene Cagg_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1302 
Symbol 
ID7268593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1601458 
End bp1602234 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID643566145 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462646 
Protein GI219848213 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00977234 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCCAC GTGATCGCGT TGTCATTATT ACCGGTGCCT CTAGTGGGAT TGGCGCTGCC 
ACCGCCCGTT GTTTCGCTGC TGCCGGCGCA CGATTGGTGT TAGCCGCCCG TTCGGCAGAT
ACGTTAGCGC AGATTGCAGC CGAACTGCCG CAAGCCCTCT CGGTACCGAC CGATGTGTCC
GATCCGGTTG CTTGTGCGCA ATTGGTGGAA CGTGCAGGAG CAACATACGG TCGAGTCGAC
ATCTTGATCA ATAACGCCGG AATTGGCCTG ACCGGTCCGG TGAGTACGCT CGCTCGCCAC
GACCTTGAGC GAGTGTTGGC GGTTGATCTG CTTGGTCCGA TCTGGCTTAT GCAGGCTGTC
GTGCCGGTGA TGCGTGCCGT CGGACGTGGC CAGATCATCA ATGTCTCATC GGTGTTGGCC
GTGCAACCGT TGCCGTACTT GGGCGGCTAC GCGGCTGCGA AAGCGGCGCT TGAACAGATC
AGCAACGCCC TGCGCATCGA GTTGCACGGC AGCGGCATTG CGGTGACGGT GGTCCGCCCT
GGTACGACCC GTACCGATTT TAATCAACGA CGGCTGGGGC GTGGTCGTGA GCGGCGCCGG
ATTGCCCCGC CCGGTGTTGC GCCGGAAGTG GTGGCACGTG CTATTCTGCG GGCAGCCCGA
ACCGAGCCGC GTCTTGCGTA TGTGAGCTGG ATGGATCGCC TGGCGCTGAT GGCGAGTCGC
TTGGCGCCGG GTGTGGTCGA AGCAGTATTA GCACGTGCCT TTCGTTGGGA AGAATGA
 
Protein sequence
MDPRDRVVII TGASSGIGAA TARCFAAAGA RLVLAARSAD TLAQIAAELP QALSVPTDVS 
DPVACAQLVE RAGATYGRVD ILINNAGIGL TGPVSTLARH DLERVLAVDL LGPIWLMQAV
VPVMRAVGRG QIINVSSVLA VQPLPYLGGY AAAKAALEQI SNALRIELHG SGIAVTVVRP
GTTRTDFNQR RLGRGRERRR IAPPGVAPEV VARAILRAAR TEPRLAYVSW MDRLALMASR
LAPGVVEAVL ARAFRWEE