Gene Cagg_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1300 
Symbol 
ID7268591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1599453 
End bp1600079 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID643566143 
Productprotein of unknown function DUF88 
Protein accessionYP_002462644 
Protein GI219848211 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000638541 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.142561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT TTTGTCGAAT CGGTGTTTTC TACGATGGTT CATACTTCTC ATATGCGCAA 
ACATACTTTT ACGCTGAGAA GAAAGTTGGC TGGCTGTCGT TTACGCCGTT TCACCGATTG
ATCGAGCAAT TCATCAGCAG CAAAGAGCAG CGTTACGCGA TGCACCGCAT TGTCTATGCG
AGTTGGCATC AGGGTCTTTT CCCTGCATCA CAGACCAATG AAAAGCAGTT TTTCATTGAG
CGCAATCGCC ACCTCGATCT GATGCACGCC GGGATCGAGC CGAAGTATGT GCCGATGGCA
CCGAGTGGAC ATGAGAAAGG GGTCGATGTG TCGTTGGCGG TTGATGTGAT GGAGCGAGTG
ATGGAGGGGA AGATCGATGT GGCCGTGCTC GTAACCGGTG ATGGTGATCT GACACCACTG
GCGCGCACGG TGATGAAGCA CGGCGTGCGT GTCGGTGTTT TTTATTTTGA ATACGATTCG
CCGCAACGGA ATAGCCGCGT CAATGGGCGC TTGATCACCG CCTGCAACTA TGCGTTTAAC
GTGAACGATC TCGAACGTGA TCCCCGCTAC GCTACCGTCT TTAAAACTCT TTTCCGCGTA
CCACAAGTCA CCGCAGCTAA GGAATGA
 
Protein sequence
MNNFCRIGVF YDGSYFSYAQ TYFYAEKKVG WLSFTPFHRL IEQFISSKEQ RYAMHRIVYA 
SWHQGLFPAS QTNEKQFFIE RNRHLDLMHA GIEPKYVPMA PSGHEKGVDV SLAVDVMERV
MEGKIDVAVL VTGDGDLTPL ARTVMKHGVR VGVFYFEYDS PQRNSRVNGR LITACNYAFN
VNDLERDPRY ATVFKTLFRV PQVTAAKE