Gene Cagg_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1288 
Symbol 
ID7266274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1586624 
End bp1587985 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content57% 
IMG OID643566130 
Productglutamyl-tRNA reductase 
Protein accessionYP_002462632 
Protein GI219848199 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGT TCCTTGCCGG TCTCGATCAC ACTACCGCGC CGGTCGAGAT TCGCGAACAA 
CTGGCCTTTA GCCAAACCGA CTTGCCTTCC GCACTCTTAC AACTGACTCA AGCCGACAAC
GGTTCGCCAC CGCTATTCAC CGAAGCGGTC ATTCTCTCAA CATGCAACCG AGTCGAGATT
TACGGCGTTG CGAACCCGGG CACGACAGCA CAGCACGTGG TCGATTTCTT GGCTAACTTT
CACCGCCGCC CCGCCGGTAG CTTCGTTCAT ACCCTCTACT TTTACCAGGG TGAGGCCGTT
GCCCGCCATC TGTGCGCGAC TGCCGCCGGG TTACGCTCGC TCGTTCTTGG CGAGGCACAG
ATACAAGGTC AGGTACGGAG CGCCTACGAA GCCGCCCAAC GGATCGGCAG CGTCGGATCA
GTTTTGCACC GCCTATTCCA GATCGCATTG GTTGCCGGTA AACGGGTACG CCACGAGACC
ACTATTGGCA AAGGTGCAGC CAGTGTCTCG CAAGCCGGGG TTGAACTTGC ACGTCGCCGG
CTCGGTGATC TGCGCGGACG CGAAGTGCTG CTGATCGGTG GTGGTGAAGT GAGTGAATTG
GCGGCCCAGA ATCTGATCGC TAACGGCGCC GACCGGTTGA CCATTGTCAA TCGCACATCG
AGCCGTGCCG CTGCATTGGC CGAACGGTAC GGTGCCGAGA TGCTCGATTT CGGTGCATTA
CCAGAAGCGC TGGCCCGCGC CGATATTGTG ATCAGCTCGA CTGCCGCTCC GGTTCCGATT
ATTTACCGTC ACCACATCGC CGAAGCACTT TCCCATAAAC AACGGATGCG TGCCTGCGGC
GATTGTGACC CGCCGGCAAT GTTGCTGATC GATTTGGCCG TCCCACGTGA TATTGCCGCC
GATGTAGCCG AGTTGCCCGG TGTTTACCTC TTCACCGTCG ATGATCTGCG AGAAGTGGTT
AGCCACACGA TAGAGCTACG TAGTGCCGTG ATAGATATTG CTAATCAGAT TGTTGAAGAG
CAAGTACGTG AGTTTAGTGA TTGGTTGCGC ACACAAGAGG CGCTGCCGGT GTTGACAATG
CTTCGTCAGC GGGCTGAAGA AGTGCGAAAC GAAGAACTTA CTCGCGCTTT GCGCCGTCTC
CACGATCTCT CGCCCGAACA ACGGGCCGTG ATCGAGGGGT TGTCCCGCAG TATTGTCAAT
AAGCTGCTCC ATCCGCCGAC CCGCTGCCTA CGTGAAGCCG CTGCACACGG TCAGGGCAAA
CGTTATGCAA CGATGCTCGC CGAGCTGTTT AATCTGGAAC ATGCACTTGA GCACAAGGCC
GGTGCCATGG GCAATACCGA ATTGACCGAT CGTATGAGGT GA
 
Protein sequence
MNLFLAGLDH TTAPVEIREQ LAFSQTDLPS ALLQLTQADN GSPPLFTEAV ILSTCNRVEI 
YGVANPGTTA QHVVDFLANF HRRPAGSFVH TLYFYQGEAV ARHLCATAAG LRSLVLGEAQ
IQGQVRSAYE AAQRIGSVGS VLHRLFQIAL VAGKRVRHET TIGKGAASVS QAGVELARRR
LGDLRGREVL LIGGGEVSEL AAQNLIANGA DRLTIVNRTS SRAAALAERY GAEMLDFGAL
PEALARADIV ISSTAAPVPI IYRHHIAEAL SHKQRMRACG DCDPPAMLLI DLAVPRDIAA
DVAELPGVYL FTVDDLREVV SHTIELRSAV IDIANQIVEE QVREFSDWLR TQEALPVLTM
LRQRAEEVRN EELTRALRRL HDLSPEQRAV IEGLSRSIVN KLLHPPTRCL REAAAHGQGK
RYATMLAELF NLEHALEHKA GAMGNTELTD RMR