Gene Cagg_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1278 
Symbol 
ID7266264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1568939 
End bp1573159 
Gene Length4221 bp 
Protein Length1406 aa 
Translation table11 
GC content59% 
IMG OID643566120 
Productcobaltochelatase, CobN subunit 
Protein accessionYP_002462622 
Protein GI219848189 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID[TIGR02257] cobaltochelatase, CobN subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC AGATCAAGCG CAATATGGTA CAGCGTCTCG ATGGGCGTCT GGTCAATGCC 
GGTGCTCGGC GTGGGATGCT GATCGTCTGT GCCACCGGCT GCTGTTGTGG TCATACCGAA
CGTGGTTTTG CCCCAGTGCC GACCGATCTC TACCACACGG AATGGGAACG GCGACGGTTA
CGCAACCGGG TTCATCTTAG TCAGGGCGGT TGTTTAGGGC CATGCCCGTT GGCGAATGTG
GCCCTGCTCC TGTTCGATGG TCGGCCCTAT TGGTTTCATT CCCTAAACGA TCCGGCGCTT
ATCCCGATCC TCTACGACTT TATCGAGGAG CTACTGGTTG CCGAACGTCC ACCGGCACCG
CCACCGGCAC TTCGTCCACA CCTATTTAAC GCTTTTGCGT GGGATGGTCT CGCCACGCCA
CCAACAGAGC GCGAGTCGCT ACCGGTGATG ACCGGTAACG GGATACTGGT GCTGAGTCAA
GCCGATACCG ATTTGCTGGC GTTGGCGCAG GCGCAGCAGT TGTTGCCGGA GGGATTTGCA
CCGGTGCAGA TGGCTCATAT CGGTCGATTG ACCGATCCTC CGGCAATCGA TCAATTGCTC
GAACAGCAAT TGCCCGCAGC GGCGATTGTG GTGGTGCGAT TACACAGTCC GGCGGCGTTT
GCCTACGGAC TTGACCGTTT ACAGCGTTGG GCAGCGACTA CCGGTGGTTT TCTTCTCTGT
TTGCCGGCAG TTGAGCAAGC CGATCCTGAT CTCATGGCAC GTTCGACCGT CGGGGTGCCA
CTGGCGATGC TCATTGCGAA CTATTTTCAA GCCGGTGGTG CGGTTAATCT CGCCAATGGC
TTGCAGTGTC TGAGCGACCA CTTGCTGGTG AGTGGTTGGG GCTACGATCC GCCGGTGGCG
TTACCGATGC ATGGGATTTA TACCCCACCT CGACCTCGCC GGCGGTCGAA GGTCGCATCT
GGGCCGGCCA TCTCTGAGGC GCCGGTGGCC GGATTGATCT TCTACCGTGC CCATCTGCTC
GGTGGCAATA CCGGTTTTGT CGATGCCCTG ATCGAAGGCT TGCAGGAGCA CGGTTTACAG
GTACGAGCGG TCTACACCCA GTCACTCAAA GAGACGAACG CTGCCGGATT ACCAATCGCA
CTCGATCTGC TCCAACAAGC CGGTCCATTC GATGTGTTGG TCTCGACCCT GAGTTTTGCG
CTGGGTGATC AGACACCGCA TCCTTTTGCG CAACTTGATG TGCCGGTAGT GCAGGCGTTG
GTCAGTAGTA CCAGCCGGGC GGCGTGGCAA CGCGATGGTC GTGGGTTAGG GCCGCTCGAT
ACGGCGATGA ACGTTGCGTT GCCCGAACTT GACGGCCGGA TTATCACGGT ACCGGTCGCG
TTTAAAGAGC AAGATGGCGC TATGCCGGCC CAGTCGGTTC CCGACCACGA ACGGATCAGG
CGATTGGCAG GGATCGTGTG GCGCTTAGCC CAGTTGCGGC GCAAACCGAA TGCGCAAAAG
CGGATCGCGA TCATCTTAAC CAACAGCAGC GCCAAGGCAC AGCGGATCGG GAACGCAGTT
GGGCTTGATG CACCGGCATC GTTGATGCGT CTGTTCGCGG CGTTGCAAGC CGAAGGGTAT
ACGGTCGCCG ATCTGCCGGC AACCGGCGAT CAACTCATCG TCGATCTCAT CGAGCGTTGC
TCGTATGATG AGACGTGGCT CACGACCGAG CAACTTGCCC GTGCGTACCG GGTACCTGCC
GAGACCTACC GGCGTTGGTT TGATGAATTG CCAGCGGAGT TACAAACGGC GATGATCCGC
CAATGGGGGC CGCCGCCGGG TCAGGCATAC GTTCATCGTG GTGAAGTGGC GTTGGCCGGA
ATCGCATTTG GCAATGTATT CGTCGCGCTG CAACCGCCGC GCGGCTACGA TATGGATCCG
AACGCCATCT ACCACCGGCC CGACCTGCCG CCGCCACACA ACTACTATGC GCTCTACCGC
TGGTTGCGCG ATGAGTGGCG CGCCGATGCG ATCATTCATC TCGGTAAACA CGGTACGCTG
GAATGGTTAC CGGGCAAGGG AATTGGGTTG AGTGCCGCGT GTTTTCCCGA TCCGTTTTTG
GCCGATCTGC CGCTGATCTA CCCCTTCATC ATCAACGATC CCGGCGAAGG GATGCAGGCC
AAACGACGGT CACATGCCGT AATTGTCGAT CATCTCACCC CGCCGATGAC CAGTGCCGGC
GCATACGGTG ATTTGGCCGA ATTAGCGCAA CTGGTCGATG AATATTATCG CATGGAGCGG
CTCGATCCGA GCAAGCTGCC GCTCTTGCAG CGCCAGATTT GGGAGGTGCT GCAACGCAGC
CAGTTGGCCG ACGATCTGCG CTACATCTTG CAAGCCGATC ACGGTGATCA TACCCACGAT
TGGGATGGGA GTGTGCTCGA AGATGGCACA CCAACGGTAT TGGCCGAATT GGAAGGGCGC
GAAGTTGCAC ATTTACTCGA AGACATCGAA GGCTATCTGT GTGAACTGAC CGGCGCGCAG
ATCCGTGATG GGTTACACAT TCTCGGTACG ATGCCGGCAA ATGAGCAGTT GATCGATCTG
GTCTACCACC TGCTCCGTTT ACCCAACCTC CACGCACCGA GCTTGCCGGC CAGCGTTGCG
GCTGCGTTGG ATGAAGATTG GCATTCGTTG CAGAGCCAGC CGGGCCGACG GCGAGCAGAT
GCTGACCAAT GGCTCACCAA TGCTGATTGT ATCGCTCATA TTGAAGATCT ATGCCGGTAC
ATACTGAGCC GGCTTCATAC TGTCGATTGG GATAGTACGA AAATCGCCGA TATTCTTAGA
CAGACGTTGC CGGCACATAG CGATCACGGG CCGGTCACCG GAGCGTTGCG CTACGCTTGT
GACTGGATCG TTCCTCAATT ACGCCAAAGT GCTACCGACG AAATTGCCCA TCTCATCGCC
GCACTGGCCG GCCGGTTCGT ACCGCCGGGG CCGAGCGGTG CGCCGACGCG CGGTATGGCT
CATGTATTGC CTACCGGTCG CAACTTCTAC AGTCTTGATC CGCGCAGTGT CCCGAGTATG
GCGGCGTGGG AAACGGGTCA AGGTTTAGCG AACGATCTTG TGCAGCGTTA CCAACGTGAA
TATGGCACCA TCCCCGAGAG CGTCGGGATC AGTATCTGGG GCACCAGTCT CATCCGAACT
GCCGGCGATG ATGTGGCGCA AGTTTTGGCG CTGCTCGGCG TGCGCCCGCG CTGGCAACGC
GAAAACCGGC GCGTCACCGG GTTTGAGATA ATCCCCCTCG CCGAGCTGGG CCGTCCGCGG
ATCGATGTTG TTTGCCGGAT CAGTGGCTTC TTCCGCGACG CCTTTCCCCA CTTGATCGAG
TTGATCGATC AGGCGGTGCA AGCGGTGATT GAGTTAGACG AACCGCCGGA GCTGAACTTC
CCGCGGAAGC ATGCGCTGAT GATGAAGCAA ACGTTAGTCG AGCAGGGGAG TGATCCGGCC
ACTGCCCAAC GCGAAGCGCG TTACCGCATC TTTGGCAGTC CGCCGGGCAG TTACGGGGCC
GGGATGCTAC AACTGATCGA CGGCCAAAAC TGGAGCAACG ACGCTGATCT GGCGCGGGTG
TACCTGAAGT GGGGTGGCTA TGCCTACACC GCAACTGAGC AAGGCGTGCC GGCGGAGGCA
GCATTTGCGG CGGCGCTCAG TATGGTGCAG GTCGCTACCA AAAATCAAGA CACCCGCGAA
CACGATATTT TCGACAGCGA CGATTACTTC CAATTTCACG GTGGTATGAT CGCGACCATC
CGCGCGCTTA GTGGTCGTAA CCCCGCCCGT TATTTCGGTG ACAGCAGTGA CCCTGCCCGT
CCGCGTACTC GTGATTTACG TGAAGAAGCG CGGCGGGTGT TTCGGGCACG AGTTGTCAAT
CCAAAGTGGA TTGCGAGCAT GCGCCGACAC GGCTACAAAG GCGGTCTTGA ATTAGCAGCC
ACGGTTGATT ACCTGTTTGG CTACGACGCC ACGGCGCAGG TACTCGCCGA TTGGATGTAC
GAACAGGTAA CCGAGCGTTA CGTGCGCGAT CAGGAGGTAC AGCAATGGTT GCAAGAGGTC
AATCCGTGGG CATTGCAAGC GATCGCCGAA CGGTTGAATG AGGCGATTGG TCGTGGCATG
TGGCAATCGC CGTCGGCGGA AGCGCAGGCA GCTATCGAAG CGGTACTGGC GCAGGGCGAA
GCCCTCCGTG AACAACAGTA A
 
Protein sequence
MAEQIKRNMV QRLDGRLVNA GARRGMLIVC ATGCCCGHTE RGFAPVPTDL YHTEWERRRL 
RNRVHLSQGG CLGPCPLANV ALLLFDGRPY WFHSLNDPAL IPILYDFIEE LLVAERPPAP
PPALRPHLFN AFAWDGLATP PTERESLPVM TGNGILVLSQ ADTDLLALAQ AQQLLPEGFA
PVQMAHIGRL TDPPAIDQLL EQQLPAAAIV VVRLHSPAAF AYGLDRLQRW AATTGGFLLC
LPAVEQADPD LMARSTVGVP LAMLIANYFQ AGGAVNLANG LQCLSDHLLV SGWGYDPPVA
LPMHGIYTPP RPRRRSKVAS GPAISEAPVA GLIFYRAHLL GGNTGFVDAL IEGLQEHGLQ
VRAVYTQSLK ETNAAGLPIA LDLLQQAGPF DVLVSTLSFA LGDQTPHPFA QLDVPVVQAL
VSSTSRAAWQ RDGRGLGPLD TAMNVALPEL DGRIITVPVA FKEQDGAMPA QSVPDHERIR
RLAGIVWRLA QLRRKPNAQK RIAIILTNSS AKAQRIGNAV GLDAPASLMR LFAALQAEGY
TVADLPATGD QLIVDLIERC SYDETWLTTE QLARAYRVPA ETYRRWFDEL PAELQTAMIR
QWGPPPGQAY VHRGEVALAG IAFGNVFVAL QPPRGYDMDP NAIYHRPDLP PPHNYYALYR
WLRDEWRADA IIHLGKHGTL EWLPGKGIGL SAACFPDPFL ADLPLIYPFI INDPGEGMQA
KRRSHAVIVD HLTPPMTSAG AYGDLAELAQ LVDEYYRMER LDPSKLPLLQ RQIWEVLQRS
QLADDLRYIL QADHGDHTHD WDGSVLEDGT PTVLAELEGR EVAHLLEDIE GYLCELTGAQ
IRDGLHILGT MPANEQLIDL VYHLLRLPNL HAPSLPASVA AALDEDWHSL QSQPGRRRAD
ADQWLTNADC IAHIEDLCRY ILSRLHTVDW DSTKIADILR QTLPAHSDHG PVTGALRYAC
DWIVPQLRQS ATDEIAHLIA ALAGRFVPPG PSGAPTRGMA HVLPTGRNFY SLDPRSVPSM
AAWETGQGLA NDLVQRYQRE YGTIPESVGI SIWGTSLIRT AGDDVAQVLA LLGVRPRWQR
ENRRVTGFEI IPLAELGRPR IDVVCRISGF FRDAFPHLIE LIDQAVQAVI ELDEPPELNF
PRKHALMMKQ TLVEQGSDPA TAQREARYRI FGSPPGSYGA GMLQLIDGQN WSNDADLARV
YLKWGGYAYT ATEQGVPAEA AFAAALSMVQ VATKNQDTRE HDIFDSDDYF QFHGGMIATI
RALSGRNPAR YFGDSSDPAR PRTRDLREEA RRVFRARVVN PKWIASMRRH GYKGGLELAA
TVDYLFGYDA TAQVLADWMY EQVTERYVRD QEVQQWLQEV NPWALQAIAE RLNEAIGRGM
WQSPSAEAQA AIEAVLAQGE ALREQQ