Gene Cagg_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1274 
Symbol 
ID7266260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1565572 
End bp1566345 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID643566116 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_002462618 
Protein GI219848185 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAA TCATTGACCG GTATGCCTTC ACCAACCGGT TGCGCGCGGT CGATCCGTTG 
CAAAAGGCTG CGCTGGCCGG GATGACGCTC CTGCTCTGTC TGGCGCTCGA TCGACTGCTG
GTGGGGTGGG TCGCGTTGGG ATGGATGGTA GCCGTGACCG TGTGGTATGC GCGGGTGCCA
CTGCGGGTGA CCGGCGCAGT CATTGGGGCT GAGAGTGTGT TCCTCGCGCT GTCGGTGATC
GGGATTGCAG TCAGTGTGGG GAACGAACCA CCGGATGCAG CGGTGTGGGC GATTCCGTTC
GGACCGCTCT GGCTGAGCGC GACCGGCGGA TCGCTGCAAA CGGCGCTGCA CGTGCTCAGC
CGCGCGCTCG GTTCGGCAGC GGCGCTCAAT TTTCTGATCC TGACCACGCC GCTGATCGAT
CTGATCGAGC TGTTGCGCCG GTTGCGCGTG CCGGCGTTGC TGATCGAAGT GATGGCGCTC
AGTTACCGCG CCCTCTTTGT CTTACTCGAT ACGCTCGACC AAATGGTTAC CGCGCAGACG
GTGCGGTTGG GGTACGCTTC GTGGCGGGCG ACCGTGCGCA GTTCGGCGCT GCTGGGCAGC
CGGTTGTTTA TCGTCGCCTA CCGGCGCAGC CAAGCGTTGG AAGTAGCGTT GACGGCGCGC
GGGTTTGCCG GCGAGCTGCG GGTGTTGCCG CTCAGCTATA CCGTTGACCG GCAGCTTTGG
GTGATCGGCG GGTTGATCGG GGCGAGTCTC GTGGCGGCGA GGTGGTGGCT ATGA
 
Protein sequence
MLRIIDRYAF TNRLRAVDPL QKAALAGMTL LLCLALDRLL VGWVALGWMV AVTVWYARVP 
LRVTGAVIGA ESVFLALSVI GIAVSVGNEP PDAAVWAIPF GPLWLSATGG SLQTALHVLS
RALGSAAALN FLILTTPLID LIELLRRLRV PALLIEVMAL SYRALFVLLD TLDQMVTAQT
VRLGYASWRA TVRSSALLGS RLFIVAYRRS QALEVALTAR GFAGELRVLP LSYTVDRQLW
VIGGLIGASL VAARWWL