Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1203 |
Symbol | |
ID | 7267952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1483091 |
End bp | 1483846 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643566046 |
Product | ABC-2 type transporter |
Protein accession | YP_002462548 |
Protein GI | 219848115 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0595438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGCTA CTTATGTCAT CTGGACCCGA CATATGCGCA AGTTCGTCCA GCAGACCGAG GAGCTGGTCG GGCTGGCACT CCAATCGGTG TTGTGGGTCG TGTTGTTTGG CGTTGGCATG CGAGGAATGA TCAGTGAGGT CGGTGGCAAC GATTATATGT CGTTCATTTT GCCGGGGATC GTCGCCCTCA GCGCCCTCGG TGGTGCGGTA GGCGGCGGCA TGGTATTGTT AGATGAGCGC CTGCGCGGAA TTGTGAAGGA ATATCTTGCC GCCCCGATCC CACGTCTCAG TGTGTTACTC GGCAGTGCAG CCAGTACTGC CACCAAATCG CTATTCCAGG CTATCTTGAT GTTGATCGTT GGTTTGCTGA TGGGAGCACG GCTGACCCTT AACCCGGTCG GTTGGCTTGG TGCGCTTAGC TTGCTGGCGA TTTTTGCCAT CGGTTTTAGC GGACTAGCGC TCGGTGTGGC AGCGGTATCA CGCAGTATTG CCGGCTATCA CGGAATGATC TTTCTCTTCA ATTTGCCACT GCTGTTCGCT TCAAATGCAC TTTACCCACT CGACGTTTTG CCGGGATGGA TGCGCACAAT TGTCCTGATC AATCCGGCTA CTTATCTCAT CGATGCAGTG CGTGCGCTGG CGTTTGGGAC CGAACCAACC ATCCCGCTGT GGCTTAGCAG CATCATCTTG ACCGGGTTCG CGATTGCGAC GATGTGGTTC GCGCTCGCCC TATTCCGACG GTCGTTGCAA TCGTAA
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Protein sequence | MYATYVIWTR HMRKFVQQTE ELVGLALQSV LWVVLFGVGM RGMISEVGGN DYMSFILPGI VALSALGGAV GGGMVLLDER LRGIVKEYLA APIPRLSVLL GSAASTATKS LFQAILMLIV GLLMGARLTL NPVGWLGALS LLAIFAIGFS GLALGVAAVS RSIAGYHGMI FLFNLPLLFA SNALYPLDVL PGWMRTIVLI NPATYLIDAV RALAFGTEPT IPLWLSSIIL TGFAIATMWF ALALFRRSLQ S
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