| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1199 |
|---|
| Symbol | |
|---|
| ID | 7267948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1477815 |
|---|
| End bp | 1478957 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643566042 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002462544 |
|---|
| Protein GI | 219848111 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000673457 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00797435 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGT TTGTCTCCAA GTTACGTCCG ACACCTGCTC AAGTGGCTTG TCTTTCTGAG
ACGGTGGAAA CTTGCCGCCA ACGCTACAAT CACGCTCTGA GCGAGCGCAA GACCGCCTAT
CAGGAACGTG GCGAGTCCAT CGGTTTTGCG CGCCAATGCG CCAGCCTGCC TATGCTGAAA
CGGGAGGTGC CGCATCTGCA GCGTGTCCAC TCCCAAGTGG TGCAGGATGT CGTGCGTCGA
GGAGACCGCG CGTTTCAAGC GTTTTTTCGG CGGGTGAACG CCGGCGAAAA GGCGGGGTAT
CCGCGCTGCA AAGGGCGGGA CCGGTACGAT AGCTTCACCT ATCCCCGGTG GGGCAACGGC
GTCAAGCGGG AGCAGGGACG GCTCGTCCTC TCCAAAATCG GCGCTCTCCG GCTGCACAAC
GATCGCCCGG TTGAGGGCAC GCCAAACATC TGTATCATCG TCCGCAACGC GGATGGATGG
TATGCACACA TCGTGTGTGA CGTTGCACCA TCACCACTCC CGCCAACCGG TAAGTCGGTA
GGGATTGATG TTGGGCTTGA GTCGTTTGCA ACGCTATCGA ACGGCGTACA GATCGCTAAT
CCGCGCTCCT ATCGTGTCGC CGAACGCACG CTGAAACAAG CACAACGACG GCTCGCTCGT
CGCGTGAAGG GCAGCAATCG CTCCCGTAAG GCACGCACGT TGCTTGCGAA CGCTCACCTG
AAGGTCAAGC GGGCGCGATG GGATTTCGCC CACACAATCG CCCGCGCACC GGTCAATGAG
GATGACCATC TTGCGGTTGA GAAACTGAAC ATTCGGGGGA TGGTACGGAA CCATCCCCTT
GCCAAATCGA TCTCCGACGC CGGATGGGGC ATCTTTCTAA ATATCCTGCT CGCCAAGGCT
GCACGTGCTG GGCGAGTCGT GGTGGCAGTC AACCCTGCCG GAACGTCGCA TATATGCGCG
CGCTGTGGCG AGTCCGTTCC CAAACGACGT GCCGTTCACT GGCACTCCTG CCCGTATTGT
GGTTGTGAAT TGCACCGCGA TCATAATGCT GCGCTTACTA TCCTAAAGAA GTGCGGGGGC
GCCGCCTTCG GGGAGGCTCA GCCGTTAGGC GGGCCGCAGA ACCGAGAACC TCACAGGCTT
TAG
|
|---|
| Protein sequence | MKTFVSKLRP TPAQVACLSE TVETCRQRYN HALSERKTAY QERGESIGFA RQCASLPMLK
REVPHLQRVH SQVVQDVVRR GDRAFQAFFR RVNAGEKAGY PRCKGRDRYD SFTYPRWGNG
VKREQGRLVL SKIGALRLHN DRPVEGTPNI CIIVRNADGW YAHIVCDVAP SPLPPTGKSV
GIDVGLESFA TLSNGVQIAN PRSYRVAERT LKQAQRRLAR RVKGSNRSRK ARTLLANAHL
KVKRARWDFA HTIARAPVNE DDHLAVEKLN IRGMVRNHPL AKSISDAGWG IFLNILLAKA
ARAGRVVVAV NPAGTSHICA RCGESVPKRR AVHWHSCPYC GCELHRDHNA ALTILKKCGG
AAFGEAQPLG GPQNREPHRL
|
|---|
| |