Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1186 |
Symbol | |
ID | 7267935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1461803 |
End bp | 1464202 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643566029 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_002462531 |
Protein GI | 219848098 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00457345 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTGCTTT ACCCGTACCA ACAGCGTGTG AGAAACCACA TTCTACAGGG TAAGTCGGTC ATCTTGCAAG CACCGACCGG GGCCGGCAAG ACGCGAGCTG CGTTGGCGCC GTTTATTGAA GGATTTTTTG ATCGGCCCGA CTCGACTCCA CGCAAGTGCT TGTACGTGAC GCCGATGCGG GTGTTGGCTA ATCAATTTTA TGCTGAGTAT AGGGCATTAG CTGATAGCTA TTGCCGTCGT CATGGCCGCC ATTTAGATGT GCGGATTCAA ACTGGCGAAC AACCAGATGA TCGACGCTTT GAAGGCGATC TCATTTTCTG CACAATCGAT CAATTTCTTA GCAGTTATTT GGTGATGCCG TACAGTTTAC CCTACCGATT GGCTAATCTG AATGCCGGAG CGATAGCGGG TTCGTATTTA GTATTTGATG AATTTCATCT GTTTGATCCT GAAGCGGCAT TACCGACGAT TTTGCATGCG TTGCCTACCT TAAGCCGGTT AGCTCCGGTG ATGTTGATGA CGGCTACCTT TAGCATTCAC ATGCTGGAAT CGTTAACGTC GTTCCTGTCC AATGCCGAGA TTGTGACACT TACGCGGGAC GAGATTACCG CCATTGATTG CCGTGGCGGA CAATCACCCC GACAGCGATA TTGGACTGCG GTCGATCAGC CGTTGTGTGC AGACGCAGTC TTACAGCGCC ACCAGCGTTC GTCGTTGGTG ATTTGTAACA CGGTGACTCG TGCGCGTGCC TTGTATCGTG AACTGAAGCA AAAGGTTGGT CAGAATACCG AACTTCTGCT CTTGCATAGC CAGTTTTTGC CTAATGATCG CCGTCGGATC GAAGGGGAGT TGCAGCGACG AATCGGTGTA AACGCAAATC GCACTTGCGC CAATGTGATC GTAGTCGCCA CCCAAGCGAT CGAAGTCGGT GTTGATATTT CCGCCGAAGT CTTACACACC GAGCTGGCAC CGCCTGCCAG TTTGATTCAG CGCGCTGGTC GTTGCGCGCG TTACCCCGGT GAAAAAGGGG AGGTGATCGT ATATCGGGTG GAGAAATATG CGCCGTATGC GTTCAAGCCT GATGAGTTGT TAAAGCGAGA GATGGACACT GCTTGGCAGT GGTTGCACGA GTGTAAGAGA GAGATTTTTG ATTTCACGCG AGAGCAGGAA CTGGTTAATA CAGTGAGTGC GCCACGCGAT GAGCAGGTGA TAGATGGTCT GAACGCTGAT CGGGTTAATC GGTCAAATTA CATTCATACC TGTCAACAAG GCAACCGTCG TGGGGCAAGC CGATTGTTGG TGCGAGATGT AGACAGCCGG CTTGTGTTAA TCCATCCTAA TCCAGATCAG TTGCTCGACT CACCATACGA TGCAATTGGA TTGAACATTC CGGTCTACTC GCTGCGCGCA ATGGTACGGG AATGGTTGCA ACGGTCAGTG ACAGCACCTT GGCGCGTTAA ACGGCTCGAT GAACGTCAGG CCGATGATCG GGCAGAAAGC CGGCAGATGG TATATCACTG GGTTGACGTT CAAGATACTA AAGAATTGGA TGAAACAGCC ATACTCGTTG TCCATCCTGT TTTAGCCGGT TATTCGGAAC GCGAAGGGTT TCTACCTGAC ACGGGTGATT TACCTTTTGT TTCGTCGTTA CCATCGGCAA CGACGCGGAT CGAGCGGGCC TTGCAACCGC TGCAGGTAGA GACCTACACT GAACATATTC AACGGGTTTT ACAAGCATTT AGCGAGCTAG CGCTTCCTGA ACTGCGCTAT GCTGCACCGG CGCTCGAGAG GGCGGCGAAT TGGCCGGAAG GGAGTCTGAT ACAAGCCGCG TGGTTGGCCT GTCTCTTGCA TGATGTTGGC AAGTTAAGTA GCGCTTGGCA GCAGTGGGCA CATGCCTATC AGCAAGCGAT CAATCAGCCG GTGGCAAAGC ACGTCGCTTT AGCCCATACC GCATTTGATC GCCAAAACCC GTCGCATGTG CAGGCACAGC AGCAGGTTTC AGCCAAGATA CCGCGTCCCC GTCATGCATC AGAGGGTGCG TTGGCATGTG CGGAGATAAT CACAGAGGCA TTAGGCAAGC AACCATCCTT AACCAAGGCA ACCATCACAG CAATTGCTCG TCATCATGCA CCGTTTGTGA ATGATTGCCA ACCATTTCAA TTGGTACCAA ACGCTGACCA AATCTTAGCC TGTACGGTAC AATACATACC ATCAGCGCTA CGCCAGCATA TCAAGGTGAA TTTGCTCTGG AAACAAAGTA ATATAAACCA AATCCAGCAG TTCGGTAATC TGATCACAAC CCCCGATGAT CAGTTTGGTT GGATGGCATA CACCTTGCTG GTACGGGCAT TACGCCGGGC AGATCAGAGA GGTACGGGGT TAGGAAGTGG AGCCTTATGA
|
Protein sequence | MVLYPYQQRV RNHILQGKSV ILQAPTGAGK TRAALAPFIE GFFDRPDSTP RKCLYVTPMR VLANQFYAEY RALADSYCRR HGRHLDVRIQ TGEQPDDRRF EGDLIFCTID QFLSSYLVMP YSLPYRLANL NAGAIAGSYL VFDEFHLFDP EAALPTILHA LPTLSRLAPV MLMTATFSIH MLESLTSFLS NAEIVTLTRD EITAIDCRGG QSPRQRYWTA VDQPLCADAV LQRHQRSSLV ICNTVTRARA LYRELKQKVG QNTELLLLHS QFLPNDRRRI EGELQRRIGV NANRTCANVI VVATQAIEVG VDISAEVLHT ELAPPASLIQ RAGRCARYPG EKGEVIVYRV EKYAPYAFKP DELLKREMDT AWQWLHECKR EIFDFTREQE LVNTVSAPRD EQVIDGLNAD RVNRSNYIHT CQQGNRRGAS RLLVRDVDSR LVLIHPNPDQ LLDSPYDAIG LNIPVYSLRA MVREWLQRSV TAPWRVKRLD ERQADDRAES RQMVYHWVDV QDTKELDETA ILVVHPVLAG YSEREGFLPD TGDLPFVSSL PSATTRIERA LQPLQVETYT EHIQRVLQAF SELALPELRY AAPALERAAN WPEGSLIQAA WLACLLHDVG KLSSAWQQWA HAYQQAINQP VAKHVALAHT AFDRQNPSHV QAQQQVSAKI PRPRHASEGA LACAEIITEA LGKQPSLTKA TITAIARHHA PFVNDCQPFQ LVPNADQILA CTVQYIPSAL RQHIKVNLLW KQSNINQIQQ FGNLITTPDD QFGWMAYTLL VRALRRADQR GTGLGSGAL
|
| |