| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1129 |
|---|
| Symbol | |
|---|
| ID | 7268583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1395924 |
|---|
| End bp | 1396844 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643565972 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_002462475 |
|---|
| Protein GI | 219848042 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0246702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAT TAATTCCGCT GAGTGAAGTA GGTGTGGTGA ACCCCACCTC GGCCACGACC
AACCGGCCCC GCCGACCCGA ATGGCTGAAG GCGCGTGCGC CCGGTGGTGT GAACTATCAC
GATGTGCTGC GCCTCATGCG CGAGAAGAAC CTGCATACGG TATGCGAAGA GGCGCGTTGT
CCTAATATTG GTGAATGCTG GAACCATCGC ACCGCTACCT TTTTGCTTCT TGGCGACATC
TGTACGCGCG GTTGCCGCTA CTGTGCGATT GGAAAAGGTA AACCCAAGCC GATTGATGAG
GAAGAACCGG AGCGGGTCGC CGAATCGGTG GCCCATCTGA GGCTGAAGTT TGCCGTGCTC
ACGTCGGTCA ATCGCGATGA TGTGCCCGAT GGTGGCGCGC ATATCTTCGC CCGCACGATT
GAGCTGATCC GGCAAAAGGT GCCCGATTGC AAGGTTGAGG TGCTCATCCC TGATTTCGAC
GGCAACTGGG ACGCGCTGGC GATGGTGTTG GACGCTGAGC CGGATGTGCT CAACCACAAT
ATCGAGACGG TGCCGCGGCT CTTCCGTCGT TTCCGCCCGC GGGCCAAGTT CGAGCAGAGT
ATCGAACTCT TGGCGCGGGC GCGCGCCGCT CATCCGCATT TGGTGACGAA GAGTGGGATG
ATGGTCGGCG CCGGTGAGAC GAACGAAGAG GTGTACGAGG TGATCGACCG GCTGCGTGAA
GTCGATGTCA ATGTGTTGAC GATTGGCCAG TATCTTGCGC CTGATGCGAG CTATTGGCCG
GTGCATCGCT ACGTCACTCC CGCCGAGTTT GCCGATTTCC GCGCCTACGC GCTGGCGCGT
GGCTTCCGCC ACGTCGAGAG CGGCCCACTG GTGCGCTCAA GCTACAATGC TCATCTGCAC
GTCGGTGCGG CCCAACATTA A
|
|---|
| Protein sequence | MSELIPLSEV GVVNPTSATT NRPRRPEWLK ARAPGGVNYH DVLRLMREKN LHTVCEEARC
PNIGECWNHR TATFLLLGDI CTRGCRYCAI GKGKPKPIDE EEPERVAESV AHLRLKFAVL
TSVNRDDVPD GGAHIFARTI ELIRQKVPDC KVEVLIPDFD GNWDALAMVL DAEPDVLNHN
IETVPRLFRR FRPRAKFEQS IELLARARAA HPHLVTKSGM MVGAGETNEE VYEVIDRLRE
VDVNVLTIGQ YLAPDASYWP VHRYVTPAEF ADFRAYALAR GFRHVESGPL VRSSYNAHLH
VGAAQH
|
|---|
| |