| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1116 |
|---|
| Symbol | |
|---|
| ID | 7268569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1373964 |
|---|
| End bp | 1375082 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565958 |
|---|
| Product | tRNA-guanine transglycosylase, various specificities |
|---|
| Protein accession | YP_002462462 |
|---|
| Protein GI | 219848029 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0035245 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000557306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA CACTACTCGT TCATCATGGT CAGCTCACAT TACCGGTATT TTTGCCCGAT
GCTACCTTTG GTACTGTTCG TTCCGTTGAT AGTCGTGATG TCGCCGAGGC CGGGATTACT
GCGCTGGTGA TGAATGTCTT TCATCTGATG CAGCGCCCTG GTAGTTCGAC GATCCATGCG
CTTGGTGGGT TGCACCGGAT GGCGGCGTGG AATGGCCCAA TCGTGACCGA CAGTGGTGGT
TTTCAGGCGT ATTCGTTAAT CCGAAGCAAT CCAAAACAGG GAAAAATCTC CGATCAGGGT
TTGGTGTTTC AGCCAGAGGG TGCCGAACGG CCATTTCACC TGACGCCTGA GAAGAGTATT
CAGCTTCAGT TGAGCTACGG AGCCGATATT GTCATCTGTC TCGATGATTG CACACACGTG
GATGATCCGC CGGCCGAGCA GCGTCGTTCG GTTGAACGAA CGGTGCGCTG GGCGAAACGA
TGTCGGGCCG AGTTTGATCG TCAATTGGCG CAACGGCGAC CGAGTGGGCC GCCGCCGTTG
CTGTTTGCGG TGGTGCAGGG CGGTGGCGAC CTCCGGCTCC GGGCCGAATG CGCTGCTGCG
TTGCTCGAAA TCGGCTTTGA TGGGTTTGGC TTTGGCGGGT GGCCGCTCGA TGCGCAGGGA
AACCTGTTGC ACGAGATACT GGCATTTACC CGCGCCCAGA TTCCGTCTCA CTATCCGATG
CATGCGCTCG GTGTCGGTCA TCCGGCGAAT GTGGTCGCTT GTGCGCGGAT GGGCTACGAG
ATGTTCGACA GTGCGCTCCC AACCCGTGAT GCCCGCCAGG GCCGATTGTT GGCGTTTACC
ACCGATCCAC ACCATCCCAG TTTTCGGTTA GAGGGCGAGT GGTTTACCTA CGTTTATCTG
GCCGATCGGA AACATATCAA GGCAGATCAC CCGATTTCGC CGGGATGTAC CTGCTTTACG
TGCCGTCACT ATAGCCTTGG CTATTTGCAC CATCTGCACA AAATCGGCGA GACGTTGGTA
TTGCGGTTGG CGACGATCCA CAATTTGCAC TTTATGGCTC AATTAATGGC GTTGATCCGT
CGTGAACGTT ATGAGGAAGA CGGCCATGGA GCAAACTGA
|
|---|
| Protein sequence | MVKTLLVHHG QLTLPVFLPD ATFGTVRSVD SRDVAEAGIT ALVMNVFHLM QRPGSSTIHA
LGGLHRMAAW NGPIVTDSGG FQAYSLIRSN PKQGKISDQG LVFQPEGAER PFHLTPEKSI
QLQLSYGADI VICLDDCTHV DDPPAEQRRS VERTVRWAKR CRAEFDRQLA QRRPSGPPPL
LFAVVQGGGD LRLRAECAAA LLEIGFDGFG FGGWPLDAQG NLLHEILAFT RAQIPSHYPM
HALGVGHPAN VVACARMGYE MFDSALPTRD ARQGRLLAFT TDPHHPSFRL EGEWFTYVYL
ADRKHIKADH PISPGCTCFT CRHYSLGYLH HLHKIGETLV LRLATIHNLH FMAQLMALIR
RERYEEDGHG AN
|
|---|
| |