| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1050 |
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| Symbol | |
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| ID | 7268422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1299520 |
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| End bp | 1301322 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643565895 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002462400 |
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| Protein GI | 219847967 |
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| COG category | [C] Energy production and conversion
[T] Signal transduction mechanisms |
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| COG ID | [COG0538] Isocitrate dehydrogenases
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA CGCCAAAAGG CGAAGCCATT CAAATCGTCA ACGGGCGCCT GCAAGTGCCC
GATCACCCGA TTATTCCTTT CGTTGAAGGT GATGGTACCG GTCGCGATAT TTGGCGGGCC
AGTGTGCGGG TCTTCGATGC TGCGGTGGCA CTGGCTTATG GTGGCAAGCG CAAAATCGAG
TGGCTGGAAG TATTGGCCGG CGAAAAGGCC TTCCAACAGA CAGGCAACTG GCTACCAGAC
GAGACCGTTG AGACGTTTCA GAAGTATCTG GTTGGCATCA AGGGACCGCT TACAACACCG
GTTGGCGGTG GTATCCGTTC ACTCAACGTA GCGCTGCGTA AGCATCTCGA CCTGTATGTC
TGTCAGCGAC CGGTACGGCA CTTTGCCGGT GTACCGTCGC CGGTGAAACA CCCCGAAAAG
GTTGACATGG TCATCTTCCG TGAGAACACG GAGGATGTAT ACACCGGGAT TGAGTATCGT
GGTGGTAGTC CAGAGGCGGC CAAAATTATC GAATTCTTAC AGCGCGAATT CCCGAAGGAT
TTCGCGAAGA TTCGGTTTGG CACCCCTGAA CAGACCGACG AGTTTCGCCG TTTGATCGGT
GAGGAACCAG AAGGTAAGAT CGAAGTCGGG ATTGGCATTA AGCCGATCAG CCGAATCGGT
ACCGAGCGCA TCATGGCGGC GGCTATTCAA TACGCGATTA ATTACAAGCG GAAGAGCATT
ACCATTATGC ACAAGGGGAA CATTCAGAAG TTCACCGAGG GGGCCTTCCG CGATTGGGCG
TATGAATATG CCGAGCGAGC TTTCGGTGAT TATGTTTATA CGTGGGCACA GTGGGAGCGC
ACGAAAGCGG CGCGTGGCGA AGCAGCAGCT AACGCTGAGC AGAAAGAGGC GCTGGCCAGC
GGCAAGATTC TGGTCAAGGA CACGATCGCC GACATTATCT TCCAACAAGT GCTGACCCGG
CCAGACGAAT TTGACGTTAT CGTCGCGCCA AACCTCAATG GCGACTACCT CTCGGATGCG
TTGGCAGCGC AAGTCGGTGG GATCGGCATC GCACCCGGCG GAAACATCAA CTATGTGACC
GGTCACGCCA TTTTCGAGGC GACCCATGGT ACGGCACCGA AGTATGCCGA TCTCGACAAG
GTGAACCCCG GTTCGGTGAT TTTGTCGGGT GAGATGATGC TGCGCTATAT GGGTTGGACG
GAAGCGGCTG ACCTTATTAT TGCCGGGCTT GAGCGCACGA TTGCCGACAA GACGGTGACG
TATGACTTCG CCCGGTTGAT GGAAGGGGCA CGCGAGGTGA AAACCTCAGA GTTCGGTAGC
TTGATCATTG CTAATATGGA GAAGATCGCT GCCGGACAGG TGCCGCACCC CGAAGAGACC
TTTGGACCGG AGATTTTGCG CCGGGCCGAT GGCAAGGTTT ATCCGCACGA TAGCGTGGGG
GCGGTGATGA CGCGGGCCGT GGTGGCCGTG CCGGCTGAGG CGTCGTTGCG CGAAACGGCG
ATCTATATGC GTGGGCGCAA TATCCACTCG GTGATCGTTA AGCCGGATGC GAGTGGGCAG
TGGGGCATTA TGACCATGCG CGACGTGTTG AAGAAGGTCG TGCGCGAGGG TCGAGCGGTT
GATGGTTTGA CTGTCGGTGA TCTGACAACA CGGCCCCTAC TGAGTGTTAG CCCGGAGACT
CCTATCACTG AGTGCGCTGC GCTGATGGTC GAGCGCAATA TTCGTCGGTT GGCGGTGGTT
GAGAATGGGG AGCCAATCGG GATTATTTCG GAGACTGATA TTTTCAGCTA CGTGGCGGAG
TAG
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| Protein sequence | MNPTPKGEAI QIVNGRLQVP DHPIIPFVEG DGTGRDIWRA SVRVFDAAVA LAYGGKRKIE
WLEVLAGEKA FQQTGNWLPD ETVETFQKYL VGIKGPLTTP VGGGIRSLNV ALRKHLDLYV
CQRPVRHFAG VPSPVKHPEK VDMVIFRENT EDVYTGIEYR GGSPEAAKII EFLQREFPKD
FAKIRFGTPE QTDEFRRLIG EEPEGKIEVG IGIKPISRIG TERIMAAAIQ YAINYKRKSI
TIMHKGNIQK FTEGAFRDWA YEYAERAFGD YVYTWAQWER TKAARGEAAA NAEQKEALAS
GKILVKDTIA DIIFQQVLTR PDEFDVIVAP NLNGDYLSDA LAAQVGGIGI APGGNINYVT
GHAIFEATHG TAPKYADLDK VNPGSVILSG EMMLRYMGWT EAADLIIAGL ERTIADKTVT
YDFARLMEGA REVKTSEFGS LIIANMEKIA AGQVPHPEET FGPEILRRAD GKVYPHDSVG
AVMTRAVVAV PAEASLRETA IYMRGRNIHS VIVKPDASGQ WGIMTMRDVL KKVVREGRAV
DGLTVGDLTT RPLLSVSPET PITECAALMV ERNIRRLAVV ENGEPIGIIS ETDIFSYVAE
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