Gene Cagg_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1047 
Symbol 
ID7268419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1297821 
End bp1298339 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID643565892 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_002462397 
Protein GI219847964 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.634523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC AGACGGTGCT CGCCGTATTG CGTGATCGCG TTGGGAAAGA AATTGTGGCC 
GTGAACGAGT TTCGTGGCGA TGTAAGCGTG ACGCTGACTC CCTCCGGCTA TCTGGCTGCT
GCCCAACTTC TCCGTGATGA TCCGGAATTG GCCTATACGT TCCTCGAAAA TCTGTGTGGC
GTTGATTATC TCGGTCGCAA GCCGCGCTTT GAAGTCGTGG CCCATCTGAC CAGTATGCGC
CATCGCCATC GGGTCTGTCT GAAAGTGGGA TGTGATGAGC CGAACCCTAC GGTACCCTCG
TTAACACCAC TGTTCCCGAC GGCGAACTAT CAGGAGCGTG AAACGTTCGA CCTGTTGGGC
ATTACGTTCA CCGGTCACCC TTCGCTGACC CGCATTTTGC TGCCCGAGGA CTGGATTGGG
CATCCTCTGC GTAAGGATTA TCCGTTAGGC GAAGAAGAAG TTGCCTTTAC GTTTAATCAG
GACCGAATCT ACGCGCACAA GCCGTTCGCG AAGGAGTAG
 
Protein sequence
MNNQTVLAVL RDRVGKEIVA VNEFRGDVSV TLTPSGYLAA AQLLRDDPEL AYTFLENLCG 
VDYLGRKPRF EVVAHLTSMR HRHRVCLKVG CDEPNPTVPS LTPLFPTANY QERETFDLLG
ITFTGHPSLT RILLPEDWIG HPLRKDYPLG EEEVAFTFNQ DRIYAHKPFA KE