| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1037 |
|---|
| Symbol | |
|---|
| ID | 7268409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1284910 |
|---|
| End bp | 1286487 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643565882 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_002462387 |
|---|
| Protein GI | 219847954 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.260264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGC CAGGCTTTCC GCTCCTCTCG CTCATCCTTT GGTTGCCGGC AGCCGGCGCC
TTGGTACTGC TCTTTGTGCC GCGCGCCAAT GCCGAGCTGG CCCGCCGGGT ATCACTTGCC
ACGATGGCGG TCGTCTTTTT GCTCTCGCTC CTGTTGCCGC TGCGGTTTGA AACAAATCCG
CTCCAGACAA CTGTCGTCGG TGCATCGCCG GTCATGCAAT TTGTCGAAGA AGTGCCTTGG
TTGCCGATTG TTGGCGCAAC TTATAGTTTA GGCATTGATG GGATCAGCCT CTGGTTGGTC
ATGTTGACCA CCTTTTTGGG GCCAATCGTT GTGCTGTCGA CATGGGATTC GGTGCATAAA
GATGTGCGTA ACTTCCAGAT TCTGCTGCTG ATTTTACAGA CGGCCATGAT CGGCGTCTTT
CTCGCGCAGG ATCTCTTGTT ATTCTACCTG TTTTGGGAGT TTACCCTTAT CCCGATGACC
TTCTTGATCG GTATTTGGGG GAGTCAGAAC CGGATTTATG CAGCACGTAA GTTTTTTCTC
TACACATTTG CCGGCTCAGT TTTCATGCTG TTGGCGTTAA TTGCGTTGCA TATCCTGCAC
CGTAATGCGA TTGCCGAAAT TGAGCCTGGA TTTCGCGGTA CCTTCAGTTT TAGCCGGTTT
GTTAGTGATT TGCGCGCCGG TCGGCTGACC CTTGATAGTC TCACCGAGCG ACTGCTGTTT
GGCGCATTTT TCCTGGCCTT TGCCGTCAAA GTACCGCTGT GGCCGTTCCA TACGTGGTTA
CCCGATGCCC ACGTTGAAGC GCCGACCACC GGTTCGGTGG TACTGGCAGG GGTGTTGTTG
AAGCTGGGCG GCTACGGCAT GATTCGCTAC AATTTGACGC TCTTCCCGGC GGCCTCTCAG
TGGGCAGCAC CGGCACTGGC GATACTGGCC GTAATCGGTA TTATTTACGG CGCGGCTGTT
GCCTTTGCTC AATCAGACAT GAAGAAGTTG GTCGCCTATT CGTCAGTGAG CCATATGGGG
TTCGTTGTCC TGGGAATCTT TGCCCTCAAC ACTGAAGGAA TTAGCGGTGC TGTGTTGCAG
ATGGTCAATC ATGGTCTCAG CACGAGTGCG CTCTTTTTGA TGGTCGGTGT GCTCTATGAA
CGGCGACATA CGCGCGAATT GGCAGCCTAT GGCGGCTTGT GGAAGGTAAT GCCGGTCTTT
GCCGCTTTCA GTCTGCTGGT TGCGCTTTCG TCGGCCGGTC TGCCGGGTCT CAACGGTTTT
GTTGGTGAGT TTACGATCAT CACCGGCGCA TTCCGTTCAC CTTTGCTAGG ATGGATCTAC
GTTGCCTTTG CCGTCGGCGG TGTTGTATTG GCCGCTGCGT ATCTGCTCAA ACTCTTCCGC
TCGATCTTTA TGGGTGAGGT ACATCAGCCG GATAATACGA AGCTGCCCGA TTTGAATCGG
CGTGAGCTAA CGACATTTGC GCTTTTGAGC ATTCCTATCG TATTGATCGG CATCTATCCG
GTGTTCTTCT TTAATGGAAT GCAGTATAGT GTGGCTGCAC TCGTAGCAGA TTTGATGGCG
CAAGTGGCAG GGAGTTGA
|
|---|
| Protein sequence | MNQPGFPLLS LILWLPAAGA LVLLFVPRAN AELARRVSLA TMAVVFLLSL LLPLRFETNP
LQTTVVGASP VMQFVEEVPW LPIVGATYSL GIDGISLWLV MLTTFLGPIV VLSTWDSVHK
DVRNFQILLL ILQTAMIGVF LAQDLLLFYL FWEFTLIPMT FLIGIWGSQN RIYAARKFFL
YTFAGSVFML LALIALHILH RNAIAEIEPG FRGTFSFSRF VSDLRAGRLT LDSLTERLLF
GAFFLAFAVK VPLWPFHTWL PDAHVEAPTT GSVVLAGVLL KLGGYGMIRY NLTLFPAASQ
WAAPALAILA VIGIIYGAAV AFAQSDMKKL VAYSSVSHMG FVVLGIFALN TEGISGAVLQ
MVNHGLSTSA LFLMVGVLYE RRHTRELAAY GGLWKVMPVF AAFSLLVALS SAGLPGLNGF
VGEFTIITGA FRSPLLGWIY VAFAVGGVVL AAAYLLKLFR SIFMGEVHQP DNTKLPDLNR
RELTTFALLS IPIVLIGIYP VFFFNGMQYS VAALVADLMA QVAGS
|
|---|
| |