Gene Cagg_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1033 
Symbol 
ID7268405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1278506 
End bp1279291 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content57% 
IMG OID643565878 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462383 
Protein GI219847950 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTAA TGGAAGGCAA AAAAGGCCTG ATTCTCGGTG TCGCCAACGA CCGTTCGATT 
GCATGGGGCA TCGCCCAAGC GTTGCATCGT GAAGGGGCGA CGATTGGCTT TACGTACCTT
GGCGAGGCGC TTGAACGGCG GGTACGCCCC TTAGCCGAAA GCATGAACGC ACCGCTGATC
GAGCCGTGTG ACGTATCGAA AGATGAAGAC ATCGCAGCAC TCATGGAACG CACCCGCGCG
ACATTCGGGC AGATCGACTT TCTCGTTCAC GCGATCGCCT TTGCCAACAA AGAGGAACTC
AGCGGTACAA TCCTCAATAC GACCCGCGAA GGCTTTCGCA TTGCACTCGA AATCAGTGCC
TACTCACTCA TCGCACTGGT CAAAGCCGCC GAACCGCTCT TTGCCCCTAA CGCTAGCGTA
CTCACCCTTA CCTACCACGG TTCACGTCAG GTCATTGGGA GCTATAACGT GATGGGAGTA
GCTAAAGCAG CGCTCGAAGC CAGCGTGCGC TACCTCGCTG CCGGTCTCGG ACCGCGTGGC
ATCCGAGTGA ACGCGATTAG CGCCGGCCCG ATTCGGACGC TTGCCGCCAG TGGTATTGCC
AATTTTCGCA GCCTGCACAA GCACTTTGCC GAGTACGCAC CGTTACGGCG CAACGTCACG
ATTGAGGATG TCGGCAATGC AGCCCTTTAT CTCTGCTCAC CACTCTCAGC CGGCGTCACC
GGTGAGATTC ATTATGTTGA CGGTGGATTC AACGTCGTTG TGCCCGGCAG TAGTGACGAA
TTATAA
 
Protein sequence
MGLMEGKKGL ILGVANDRSI AWGIAQALHR EGATIGFTYL GEALERRVRP LAESMNAPLI 
EPCDVSKDED IAALMERTRA TFGQIDFLVH AIAFANKEEL SGTILNTTRE GFRIALEISA
YSLIALVKAA EPLFAPNASV LTLTYHGSRQ VIGSYNVMGV AKAALEASVR YLAAGLGPRG
IRVNAISAGP IRTLAASGIA NFRSLHKHFA EYAPLRRNVT IEDVGNAALY LCSPLSAGVT
GEIHYVDGGF NVVVPGSSDE L