Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0961 |
Symbol | |
ID | 7268034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1189480 |
End bp | 1190157 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565809 |
Product | putative transcriptional regulator |
Protein accession | YP_002462315 |
Protein GI | 219847882 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.189509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACA CTCGGTACCC ACCTGATAGT CCGGCCGGTA TGATCTTGTG CTACTTGCAG CGCCATGCGC GAGCAACCGT CAAAGAGCTG GCCGATTTAC TCGGCGTCAG CACGACGGCA GTGCGCGATC ATTTGGTGCA TCTGCAAGCA GAAGATATGG TCGAAGTGAC CAGTGAGCGC AACGGGCCGG GTCGGCCACG GCTGGTTTAT ACCTTGTCGG AAAAAGCGCA GAAGTCCTTC CCCAAACAGT ACGATCGCTT GATCAGTACC TTACTGCGCG AGCTGATCGA ACTAGAAGGG GAAGGGAAGG TTGAGCAATT GCTCGACCGA GTAAGCAGGC GTTTGGCGAG CGAGTACGCC GATCGAATGG CCGGTACCGA TGTGGCTGCT CGGCTCAATG AGCTGCGAGC TTTGCTCGAG CAGCGTGGTG TACCGGCCGA GATCGAGCCT GAAGGCGATG TGTTGCGCTT GTTCGCCTGT CCGTTCTACG ATGTGGCAGC CGATCATCCT GAGGTCTGTT CGATGGAGCG ACGTATGATC GAGTATGTAC TGGGCGAAAA GCTCGTACTC GAGGATACGA TCCGATCCGG CGCACACAAC TGTCGCTTCG TGCTGCGCCC GCAGGATATT CCACTGACAT TGACGCCACC GGCTGCTGAT GTTAATCCTG ATAGGTAA
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Protein sequence | MEHTRYPPDS PAGMILCYLQ RHARATVKEL ADLLGVSTTA VRDHLVHLQA EDMVEVTSER NGPGRPRLVY TLSEKAQKSF PKQYDRLIST LLRELIELEG EGKVEQLLDR VSRRLASEYA DRMAGTDVAA RLNELRALLE QRGVPAEIEP EGDVLRLFAC PFYDVAADHP EVCSMERRMI EYVLGEKLVL EDTIRSGAHN CRFVLRPQDI PLTLTPPAAD VNPDR
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