Gene Cagg_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0959 
Symbol 
ID7268032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1187441 
End bp1188655 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content57% 
IMG OID643565807 
ProductFeS assembly protein SufD 
Protein accessionYP_002462313 
Protein GI219847880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA CGTTGCCTAC TTTGAACGAG ATCAGCGCCG AGTTCGTCGT GGCGCGTTCG 
CAAGCTGCCG GCGAGCCGGC ATGGCTCACC GATCGTCGGC GGGAAGCATG GGCTGCCTTT
GCCCAGATGA ATCCGCCCGA GTGGCGGCGG ACCGATCTTA GCAAGCTTGA TCCGACGACG
ATTGCTCCCT CAGATAGTGC GCATGCGACG GCGATCCAGT GGGATCCGGC GTTGGCTGCG
CAAGGTGTCG TCTTTACGAC GCTGGCGGCG GCATTACGCT CGCACGAAGC ACTGATCCAG
AAATATATGG ATACGGCAGT TGAGCCGTTG AAGCATAAGT TTAGCGCGCT GCGGGCTGCC
CTCTGGCAAG ACGGTGCGTT CCTGTACGTG CCGAAGGGTG TCGCTATCGA GGTGCCGCTC
CGCCTGATCT ATACGCTCGG TACCGATGGT GTGGCGATTT TTCCACGCAC CTTAGTCATC
GTTGAACCAC AGGCGAGCGT TACGCTGATC GAGGAGTTTA CCTCGCCCGA TCTGCGTGCC
GGTTCCTTTG CCGGTCCAAT CACCGAGATC TTCGTTGGCG ATGGAGCAAG TGTCCGCTTC
ATCAGCATTC AACATTGGGG GCGCGGTGTC TACCATCTGG CCGGTCAGCG CGCCATCCTG
AATCGCGATG CCAATCTAGA ATGGACGTCG ATCCAGCTTG GTGGTCAAGT GCAGCATATC
GAAGCTGAGG CGACACTGGT TGGTAACGGT TCACGCCTCA ATTGGCTCGG TGCGACGTTT
GCTGCCGATA GCCAGAACTT GGTGATCGCG CCGTGGATGC GCCACGTCGG TCATAATTGC
GAGAGTTTCA TGCAATTTAA GACGGTAGTC AACGACACGG CCTACAGTGT CTTCGATGGT
ATGATCAAGA TCGAGCACGA GTCGGCGGCT ACCAGTACGC GGCTGGAAGA GCATGCCTTG
CACCTTAGCC CCAAGGCGCG TAACGATAGT ATTCCCGGTC TGATGATTAG CACGAACGAT
GTGCTGAAAG GCGGGCATGC TTCAACCAGC GGCGATATCG ATCAAGAGCA GCTCTTCTAT
ATGCAAACTC GCGGTATTCC GCGTGCCGAA GCGCAACGGA TGATCGTGAT GGGCTTCTTT
GAGCCGGCGC TCGATACGAT CCCGCTTGAA GAGTTGCGTG CCGAGTTGAT CGCTGAAATC
GCAGCAAAGA TCTAA
 
Protein sequence
MTTTLPTLNE ISAEFVVARS QAAGEPAWLT DRRREAWAAF AQMNPPEWRR TDLSKLDPTT 
IAPSDSAHAT AIQWDPALAA QGVVFTTLAA ALRSHEALIQ KYMDTAVEPL KHKFSALRAA
LWQDGAFLYV PKGVAIEVPL RLIYTLGTDG VAIFPRTLVI VEPQASVTLI EEFTSPDLRA
GSFAGPITEI FVGDGASVRF ISIQHWGRGV YHLAGQRAIL NRDANLEWTS IQLGGQVQHI
EAEATLVGNG SRLNWLGATF AADSQNLVIA PWMRHVGHNC ESFMQFKTVV NDTAYSVFDG
MIKIEHESAA TSTRLEEHAL HLSPKARNDS IPGLMISTND VLKGGHASTS GDIDQEQLFY
MQTRGIPRAE AQRMIVMGFF EPALDTIPLE ELRAELIAEI AAKI