Gene Cagg_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0956 
Symbol 
ID7268029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1184244 
End bp1185659 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content56% 
IMG OID643565804 
ProductFeS assembly protein SufB 
Protein accessionYP_002462310 
Protein GI219847877 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.983445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCTG AAGCAGTCAA TTTGCAGTTC GACTACTCGC GCTATGGCTT CCGACAGGAA 
GAGCGCTATG TCTATAAAGC ACCCAAGGGC CTGAATGAGC GCATTGTGCG CGAACTTTCC
GGCATGAAGG GTGAGCCGGA GTGGATGTTG AAGCGACGGC TGCGCGCGTT GGAGATTTTC
AATAAGAAGC CAACGCCGCT CGTCGGGATG TGGGCCAATC CCGAACTGGC CGAGTTGAAC
TACGACGACA TCCACTACTT TGTGCGGGCC AACGAACGCC CACAGACCGA CTGGGATGCG
GTGCCGCCGG AGATTAAGAA TACCTTCGAG CGGCTGGGTA TTCCTGAGGC TGAGCGTAAA
TTCCTTGCCG GTGTCGGTGC TCAGTACGAG TCGGAAGTTG TCTACCACTC GCTGCGCGAA
GAGTGGGCAA AGCAAGGTGT GATCTTCCTT GATACCGATA CCGCGCTGAA AGAGTACCCT
GAGTTCTTCA AGGAGTACTT CGGTACCATT GTGCCGGCGG CTGACAACAA GTACGCTGCG
CTCAACACCG CGGTCTGGTC AGGCGGCTCG TTTGTCTACG TGCCGAAGGG TGTGAAGGTT
GATATTCCGC TGCAAGCTTA CTTCCGCATC AACGCCGAGC GGATGGGTCA GTTTGAGCGC
ACCTTGATCA TTATCGATGA AGGGGCTGAG GCCCACTACA TCGAGGGTTG CACGGCGCCG
ATCTACAGCA CTAACTCGCT GCACTCGGCG GTGGTCGAAG TTATCGTCAA GAAAGGTGGT
AAGTTCCGTT ACACCACCAT CCAGAATTGG GCCAACAACA TCTTCAATCT CGTTACCAAG
CGAGCGGTGG CCTACGAAGA GGCCAGTATG GAGTGGGTGG ACGGCAACAT CGGCTCGAAG
CTGACCATGA AGTACCCGTC GGTATATCTG ATGGGCCGCA AGGCGCGTGG TGAGGTGCTC
TCGGTAGCGT ATGCCGGGCG TGGTCAGCAC CAAGATGCCG GTGCCAAGAT GGTGCATCTC
GCTCCCGAAA CGACCTCGCG CATCACCAAC AAGTCGGTGA GCAAGGATGG TGGTAAGACA
ACCTACCGCG GTTTAGCTAA GGTGGCGCCG GGTGCCTATG GCGCGAAGAT CAATGTCAAC
TGCGATGCTC TGATCCTCGA TGAGAATTCG GCGTCGGATA CGATCCCGTA TATCGAGATC
GAGGAAGATC GCTGCACGTT GGCCCACGAA GCAACGGTTG GCCGCATCGG TGCTGAGCAG
CTCTTCTACC TGATGAGCCG CGGTATCTCT GAGTCGGACG CGCTATCGAT GATCGTGCTC
GGCTTTATGG AGCCGTTCAC CCGTGAGCTG CCGATGGAAT ATGCGGTTGA ATTGAACCGT
CTCATCCAGC TTGAGATGGA AGGTTCGGTG GGTTAG
 
Protein sequence
MVAEAVNLQF DYSRYGFRQE ERYVYKAPKG LNERIVRELS GMKGEPEWML KRRLRALEIF 
NKKPTPLVGM WANPELAELN YDDIHYFVRA NERPQTDWDA VPPEIKNTFE RLGIPEAERK
FLAGVGAQYE SEVVYHSLRE EWAKQGVIFL DTDTALKEYP EFFKEYFGTI VPAADNKYAA
LNTAVWSGGS FVYVPKGVKV DIPLQAYFRI NAERMGQFER TLIIIDEGAE AHYIEGCTAP
IYSTNSLHSA VVEVIVKKGG KFRYTTIQNW ANNIFNLVTK RAVAYEEASM EWVDGNIGSK
LTMKYPSVYL MGRKARGEVL SVAYAGRGQH QDAGAKMVHL APETTSRITN KSVSKDGGKT
TYRGLAKVAP GAYGAKINVN CDALILDENS ASDTIPYIEI EEDRCTLAHE ATVGRIGAEQ
LFYLMSRGIS ESDALSMIVL GFMEPFTREL PMEYAVELNR LIQLEMEGSV G