Gene Cagg_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0943 
Symbol 
ID7268016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1171693 
End bp1172148 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content54% 
IMG OID643565791 
ProductUspA domain protein 
Protein accessionYP_002462297 
Protein GI219847864 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0887098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCC ACATTCTCGT CCCACTTGAT GGCTCAGCGC TTGCCGAACA GGTATTGCCA 
CACGTTCATG CACTTGCCGC TAATGAAGGT ACGAAGCAGA TTACCCTGCT CCGTGCAGTA
CCACCGATCT TCACTACTAG TGTTGATTAC AGCGGCATGT TGGCGACCAC AGCCGATGCG
ATCACCACAA TGGAGCAGGA AGCGCTCGAA TACCTACAGC ATATCGCTAA ACAGTTCCAA
GGTGAGGGTT ATCAGGTTCA CATTGAGATT AGCGCACTGC CTCCTGCCGA AGCGATTATC
GAATACGCCG AAAACCACGA TGTTGATCTG ATCGTGATCG CCACGCATGG CCGTAGCGGG
CTGAGCCGGT GGGTGTTTGG CAGCGTTACG CAGAAGGTCG TGCAAGTCGC ACCAACACCG
GTGCTGGTGA TCCGTCCGAA GGAGGTGAAA GCGTAA
 
Protein sequence
MYRHILVPLD GSALAEQVLP HVHALAANEG TKQITLLRAV PPIFTTSVDY SGMLATTADA 
ITTMEQEALE YLQHIAKQFQ GEGYQVHIEI SALPPAEAII EYAENHDVDL IVIATHGRSG
LSRWVFGSVT QKVVQVAPTP VLVIRPKEVK A