Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0937 |
Symbol | |
ID | 7268010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1166081 |
End bp | 1167076 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565785 |
Product | Squalene/phytoene synthase |
Protein accession | YP_002462291 |
Protein GI | 219847858 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0100379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCTGA ATTCGATCTC GGTTATCACG CGCGGGAACG GATTGCCGGT TAGCCAGGCA CTTCCGGCAG ACGAGCAGCT TGCTCAGCTC TTTCATCTCA GCGATGTACC TTCCTCGTCA AGTGCCGACC AACTGCCACC GCCGCGTGTT CGTTCGCTGG CAGAGGCATA TGCCTTCTGT GATGAGGTGA TCCGCCGTCA CTCCAAGAGC TTTTTCTTTA GTACCCAGTT TTTGCCGCCA CCACAACGAC GAGCCGTGCG AGCGTTGTAT GCGTTCTGTC GCACAACCGA TGATACGGTT GATATGGCGA GGACTGACCC GGCCAGGGCA TTAGCCGAAT GGGTGCGCGT GGCTCGTCGT CCGTGCCTCG ATACGGCGCA CCCGGTCCTT TTGGCATGGG CCGATACTTG CCAACGGTAT AACCTTTCAC CGCACCTCAT CGATGAGTTG TTGGCCGGAG TAGCGATGGA TCTGACGATC TCGCGCTATG CCACGTTTGC CGATCTGTGG CTCTATTGCT ACCGGGTCGC ATCGGTGGTG GGGATGTTGG TGATTGGGAT TACCGGTGCT GCGCCCGGAG CGACACCATA CGCGATTAAG CTAGGAGTGG CCTTGCAGTT GACTAATATC CTGCGCGATG TTGGCGAGGA TGCCAATCGT GGGCGGGTGT ATCTGCCGAT CGATGAACTG GCTCGCTTTG GTTTGACTGC CGATGATATT CTGGCCCGGG TCTACGATGA GCGCTTCATT GCATTGATGA AGTTTCAAAT CGAACGTACC CATCGTTTGT ACGATGAGAG TTGGCCCGGT ATCGCGCTCT TGCCACCTGA AGTGCGATTG GCCGTAGCGG CCGCAGCGCG CGTCTACCGC GGCATCCTTG ATAAAATCGT TGCTAACCGG TATGATTCAT ACAACCACCG TGCGTATCTG TCGCTGCGCG AGAAGGTGGC ACGTTTGCCC GGTATTTGGT GGGATGTTCA TCGCTTGGGT AGGTAG
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Protein sequence | MSLNSISVIT RGNGLPVSQA LPADEQLAQL FHLSDVPSSS SADQLPPPRV RSLAEAYAFC DEVIRRHSKS FFFSTQFLPP PQRRAVRALY AFCRTTDDTV DMARTDPARA LAEWVRVARR PCLDTAHPVL LAWADTCQRY NLSPHLIDEL LAGVAMDLTI SRYATFADLW LYCYRVASVV GMLVIGITGA APGATPYAIK LGVALQLTNI LRDVGEDANR GRVYLPIDEL ARFGLTADDI LARVYDERFI ALMKFQIERT HRLYDESWPG IALLPPEVRL AVAAAARVYR GILDKIVANR YDSYNHRAYL SLREKVARLP GIWWDVHRLG R
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