Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0905 |
Symbol | |
ID | 7267978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1133461 |
End bp | 1134546 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565753 |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_002462259 |
Protein GI | 219847826 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000725553 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000024964 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAGCCT TCCCTCAGAA TCATCACCTT GCCGACGGTG AAATTGAACC GGAAGAGACC GCTGAGGCTG CCGAACTCGA TGCTGAGTGG GATGGCGATG TTGAACTCGA AGCCGAGGAT GAAGCACTCA TCGAGTCGCT TGAAGACCTC AGCGATGAGA TCGATGTCGA TATCGAGCCG GTCGAAGATT CGGTACAGCT TTACCTACAG GAGATCGGGC AAGTTCCCCT CCTTACCGCC GAAGAGGAGG TAGAGCTGGC CCGGCAGTAC CGTCGCGGCA AAGAGGCCCG TCAGCGTTTA CAAAACGAAG ATTACGCAAA TGACCGCGAG CGGATGCGGC TCGAAATCGA GCAGGCCCGT GGTGAAGAGG CACGTCGGCG CTTGATTCAG GCTAACTTGC GTCTCGTGGT CAGTGTGGCA AAGAAATATA TTGGTAGCCC GATGGCTTTC ATGGATTTAG TCCAAGAGGG TAACATCGGT TTGATGCGGG CAGTTGAGAA GTTTGATTAC ACCAAAGGCA ATCGGTTTAG TACGTATGCC ACGTGGTGGA TTCGGCAGGC GGTGACGCGC GCAATCGCCG AACAAAGTCG TCTGATTCGC TTGCCCGTAC ACCTCAGCGA GTCGATTGTT CATCTGCGTC GTGCCATTTA CCGTCTCGAA CAAGAGCTTG AACGCGAACC GACCCCCGAA GAGCTAGCGC ATGCACTGAA CATGAGCCTA CGGAAGGTCA AGCGGTTGTT GCGCGCTTCA ACCCAACCGA TCTCGCTCGA ACAACCACTC AATGCCGATC AAGAGGGTCG GGTGAGCGAG ACTCTTGCCG ACGAGACAGC AGCTTCACCG ATGGAGATTG CCGAGCAGAA TATGCTACAA GCTGAACTGA ATGCGGCGCT CAACGAGCTA CCCGAACGCG AACGCAAGAT TTTACAGTTG CGCTACGGTT TGCTCGATGG TCAGCGCCGC ACTCTCGAAG AGGTTGGTGC TACGTTTGGC ATTACCCGCG AGCGCACACG CCAGATCGAG GCCGAAGCAC TCCGCCGCTT GCGCCATCCG AGCGTCGGCA ACCGATTGTT CGGCTATCTC GAATGA
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Protein sequence | MKAFPQNHHL ADGEIEPEET AEAAELDAEW DGDVELEAED EALIESLEDL SDEIDVDIEP VEDSVQLYLQ EIGQVPLLTA EEEVELARQY RRGKEARQRL QNEDYANDRE RMRLEIEQAR GEEARRRLIQ ANLRLVVSVA KKYIGSPMAF MDLVQEGNIG LMRAVEKFDY TKGNRFSTYA TWWIRQAVTR AIAEQSRLIR LPVHLSESIV HLRRAIYRLE QELEREPTPE ELAHALNMSL RKVKRLLRAS TQPISLEQPL NADQEGRVSE TLADETAASP MEIAEQNMLQ AELNAALNEL PERERKILQL RYGLLDGQRR TLEEVGATFG ITRERTRQIE AEALRRLRHP SVGNRLFGYL E
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