Gene Cagg_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0873 
Symbol 
ID7268324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1083489 
End bp1083863 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content54% 
IMG OID643565719 
Productprotein of unknown function DUF1232 
Protein accessionYP_002462228 
Protein GI219847795 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0685526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAA CCCTCAAGCG CCATGCCCAC ACACTTAAGC GCGAAGCCTA CACACTGTAC 
ATTGCTCTGC GCGATCCGCG AGTACCCTGG TACACCAAAG TGCTGCTTGC CCTAGTGGTA
GCCCATACCT TCAGTCCCAT CGATCTTATT CCTGATTTCA TACCGGTGCT GGGGTATCTA
GACGATCTCA TCTTAACCCC ACTCGGTATC TGGCTCGCAC TCAAACTTAT CCCACCGGAG
GTGATACATG CAGCCCGCCA ACAAGCAACA ACCTTAGACG AACAAGGGAA GCCGGTCAGT
CGCATCGGTG CTATGATGGT GATCGGGATC TGGCTGATCG GTCTGATTGG CCTGCTCTGG
TGGTGGTTCT CATAA
 
Protein sequence
MLTTLKRHAH TLKREAYTLY IALRDPRVPW YTKVLLALVV AHTFSPIDLI PDFIPVLGYL 
DDLILTPLGI WLALKLIPPE VIHAARQQAT TLDEQGKPVS RIGAMMVIGI WLIGLIGLLW
WWFS