Gene Cagg_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0828 
Symbol 
ID7268280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1029798 
End bp1030895 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content56% 
IMG OID643565678 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_002462187 
Protein GI219847754 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGG TTGCCCGTCC TCTGATCGGT CGTGAAGAAG AAGAAGCTGT ACTGGCCGTG 
CTGCGATCAG GCATTATCGC GCAGGGGCCG GAAGTAGAAC AGTTCGAGAC CGAATTTGCC
GCCGTGTGTG GTACCCGCTA TGCCGTGGCG GTTACGAATG GTACTGCTGC ACTCTATCTT
GCACTACTAG CCCACAATAT TGGGCCAGGC GACGAAGTGA TTACAACGCC GTTTAGCTTT
GTTGCTACCG CCAACAGCAT TCTAATGACC GGCGCAACCC CGGTGTTCGT CGATATTGAT
CCACAGACCT ACAACCTCAA CCCCGATCTG ATTCCGGCGG CAATCACACC ACGCACACGA
GCAATTATGC CGGTGCATTT GTACGGTCAA CCGGCCGATA TGGCGCCGAT TATGGAACTT
GCGCGACGCT ATCACCTCGC CGTGATCGAG GATGCAGCGC AAGCGATCGG TGCAACCTAC
CGTGGGCAGC CGGTCGGTAG TTTTGGTGTG GGCTGCTTCT CACTCTACGC CACCAAGAAT
ATTACGAGCG GTGAAGGGGG GATGATCACG ACCAACGATC CGGCCATCGC CGAACGACTC
CGTTTATTAC GCAATCACGG CAGTCGGGTG CGTTATTACC ACGAAATGCT CGGTTACAAC
TTCCGTATGA CCGATGTGCT TGCAGCCATC GGGCGCGCAC AATTGGCAAA GTGTGACCGA
TTTACCCACC GGCGGATTGC CAACGCGGCG TTTCTCAGCC AGCACATCAA CCACCCGACA
GTGATCACAC CCTTTGTACG GCCTGATGTC CGGCACGTCT TCCACCAATA CACCATTCGC
GTGATCGGTG ATCGGGATGC GGCCATACAG CAGTTAAGCG CTGCCGGCGT AGGCACGGCG
ATTTTCTACC CGTTGCCAAT CCCACAACAA CCTTTGTACC GTCAATTGGG GATCGAAGCC
GAAACGCCGG TCACCGACCG CGTTGCCCGC GAGATTATCG CGCTGCCGGT GCATCCGGGA
TTGAGTGAAG AGGATCTGCA TCAGATTGCG ACCGCAGTCA ATGAGCTACA AATACGCGAG
CCGGCGCTAA CCATCTAA
 
Protein sequence
MIPVARPLIG REEEEAVLAV LRSGIIAQGP EVEQFETEFA AVCGTRYAVA VTNGTAALYL 
ALLAHNIGPG DEVITTPFSF VATANSILMT GATPVFVDID PQTYNLNPDL IPAAITPRTR
AIMPVHLYGQ PADMAPIMEL ARRYHLAVIE DAAQAIGATY RGQPVGSFGV GCFSLYATKN
ITSGEGGMIT TNDPAIAERL RLLRNHGSRV RYYHEMLGYN FRMTDVLAAI GRAQLAKCDR
FTHRRIANAA FLSQHINHPT VITPFVRPDV RHVFHQYTIR VIGDRDAAIQ QLSAAGVGTA
IFYPLPIPQQ PLYRQLGIEA ETPVTDRVAR EIIALPVHPG LSEEDLHQIA TAVNELQIRE
PALTI