| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0784 |
|---|
| Symbol | |
|---|
| ID | 7268103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 971173 |
|---|
| End bp | 971820 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643565635 |
|---|
| Product | channel protein, hemolysin III family |
|---|
| Protein accession | YP_002462144 |
|---|
| Protein GI | 219847711 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAC ACACACCTTC AGAACACTTC TCACCTGACG AAGAGCGGAT TAACATTATC
ACCCATGGCG CCGGCGCGGT GCTTAGTGCA ATCGCCGGTA TCGTCTTAGT CGGTGCGATC
TGGCAACGCG GTGATGGCTG GCAACTGGCC GGCACGATGA CCTTCTGCGT TACGCTCACC
TTACTCTATC TTGCTTCAAC GCTGTACCAT GCCAGCCGCG AACCGCGTCG CCGCGCAATC
CTCGAGATTT TCGATCATAG TGCGATCTTT CTGCTGATTG CAGGCACCTA CACACCGTTT
ACCCTGATCA GCCTACGCGG CACGTGGGGA TGGATCTTGT TTGGTCTGGT GTGGGGGTTG
GCGCTGGCCG GAGTTGTCAT GAAGCTCTTT CTCACCGGAC GGTTCCGTAT TCTCTCAACC
CTCGTCTACA TCGCACTTGG GTGGATCGTC GTTGTCGCGG CTGATAAAGT GCTTAATACC
TTGAACCCCA CTACCATTGG CTTATTGCTC GCCGGTGGGA TTGCGTATAC TGCCGGGACA
CCATTCTACA TCCTGTCACG ACGCCGCTAC ATGCACAACA TTTGGCACGT GTTTGTCCTT
CTTGGCAGCT TGTGTCACTT TGCAGCAGTT GTATCAATTG TGTTGTAG
|
|---|
| Protein sequence | MSQHTPSEHF SPDEERINII THGAGAVLSA IAGIVLVGAI WQRGDGWQLA GTMTFCVTLT
LLYLASTLYH ASREPRRRAI LEIFDHSAIF LLIAGTYTPF TLISLRGTWG WILFGLVWGL
ALAGVVMKLF LTGRFRILST LVYIALGWIV VVAADKVLNT LNPTTIGLLL AGGIAYTAGT
PFYILSRRRY MHNIWHVFVL LGSLCHFAAV VSIVL
|
|---|
| |