Gene Cagg_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0747 
Symbol 
ID7268066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp924678 
End bp925397 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID643565598 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462107 
Protein GI219847674 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.785555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.162372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGA AAGGGCGCGT TGCAATTATT ACCGGTGCTT CTAGTGGAGT TGGCTATGCG 
GCGGCTCGTC TGTTTGCTCG TGAAGGGGCA ACCGTCATTG TTGCCGCCCG CCGACATGAT
CGTCTCGAAC ATTTGGTTAG TATGATTACT ACAGAAGGGT ATCACGCCTT TGCTATCCCC
ACCGATATTA CCGTCTCGGC CCAGGTCCAG CATTTAGTCG ATACAACGGT GCAAATGCTT
GGTCGGATCG ATATTTTACT CAACTGCGCC GGTAATGTAG AGAAGATCGC ACCGCTTGAG
CAGTTTAGCG ATGCCGAATG GCAGTCGGTC ATGAATGTCA ATCTTAACGG TGTGTTTTAC
CTGATGCGCG CAGTAGTGCC CTATATGAAG CGTCAGCGCA GCGGAACCAT TGTGAACCTC
GGTTCGCGGG TGGGCAAGAT CGGGGTGGCC AATATTGCAC CGTTCTGCGC GGCTAAATTT
GCGCTGTCAG GGTTGTCGCA GGCGCTTGCC CAAGAGTTGC GCCCCTACAA TGTCTTCGTG
ACGACCGTCT TCTCTGGCAT GATCGATGCC GATATTGCGC CGCTGAATCC GGCTGAAGAG
TTGCGCAAAC GGTTGATGAC CGTCGAAGAC GTGGCGCAGG CATTGTTGTG GGTCTGTACG
CTGCCGCCAA GCCTGCGGGT TGATGAGTTA CCCATTATGC CACGCACGGT CGATTTGTAA
 
Protein sequence
MRLKGRVAII TGASSGVGYA AARLFAREGA TVIVAARRHD RLEHLVSMIT TEGYHAFAIP 
TDITVSAQVQ HLVDTTVQML GRIDILLNCA GNVEKIAPLE QFSDAEWQSV MNVNLNGVFY
LMRAVVPYMK RQRSGTIVNL GSRVGKIGVA NIAPFCAAKF ALSGLSQALA QELRPYNVFV
TTVFSGMIDA DIAPLNPAEE LRKRLMTVED VAQALLWVCT LPPSLRVDEL PIMPRTVDL