| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0662 |
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| Symbol | |
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| ID | 7266913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 815587 |
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| End bp | 817632 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643565523 |
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| Product | Shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_002462033 |
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| Protein GI | 219847600 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0104064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000472149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGAG TAGTTAGCAT TAGTCTCGGT TCGGCGCAGC GTGACTACCA AATCACGGCA
ACGGTGCTTG GCCGGCAGGT TGAGGTGCGC CGGATTGGCA CTAACGGTGA TGTAGCCCAG
GCGATGGCCT TGATCCGGGA ATTTGATGGC AACGTTGACG CAATCGGTCT CGGTGGGTTG
ACGCCGGTGT TTCGGATTGG TCGTGCCCGT TATCCGCATC AAGAAGCGAT CCATATCGCA
GCGCAGGCAC GGCGGACGCC GGTAGTTGAT GGTGGTGTCG TCAAGGCAAT CTTGGAACGA
TGGGCGATTG CGCAGGCAGT GCGTCAGATC CCTTCATTAG TGCGGTACAA GCGCGTATTG
ATTGCCAGTG GCGTCGAACG CTATCAATTG GCAGCCGCAA TCGCTCAGTA CGAACCAGAA
TTGCGTTTTG CCGATCCGAT TATCCACGCC GGTCTTCCCT TCTTACCGCC ACCGCGTTCG
CTTGAACAAC TCGAATTGTA CGCGGCTACT GCGCTACCGC TGCTCGCTCT CCTCCCTTAC
CGTTTTATCC ACCCGGTCGC GCTCGGTCAA GAAGGTTATG ACCCACGTGC TGCCGCTCTC
TTTCAATGGG CTGATGTCAT TGCCGGCGAT TTTGCCTTCA TCCGTCGCTT TGCCCCGGCC
GACCTGACCC GCAAAGCAGT TATCACCGAT GATCCGTCTC CGGCGGAAAT CGAGGACTTG
CGCCGGCGCG GAGTGACGAC CTTGGTGACG ATGACGCCAC CCCTGAGTGA CGAACGTCCC
TTTCTGGCGG CTGATGCGAT CGAGGCGATC ATTACGGCGA TTACCGAGAG TACGCGCCAG
CCCGGTGATG CCGAAGTCAT CGATTTTATT ACCGCTGCCG GCTGGGGACC GACGGTGCAA
GACCTTAATC CGCGCCCGAA GCCGCGCTTT GCCTTTGTCA TCCATCCGTT GCGGACCGAA
CTGATTGCCA ATCACCGCTG GTTCCGTTGG ACGCGCTACC TGCCGCCGCG TTTGGTGGAG
CTAGTTGCTG CCGAGTTTCC ACCGCTCTAC CTGTCGCGGA TCCGTGGGAT TCGCTCGAAA
GCAACCGGTG AAGAGGTCGA GGGTATCCTC CTCACCCTCG GCACGACTCC GCGCGAGATG
ATGCGTCGAC CACCGAGTTT TACTTATCGC CGGTTGATCA AAGCGGCGCG GATGGCCGAA
CGGATGGGGG CGCAGATTAT GGGCTTGGGC GCATTCACCT CTGTCGTCGG TGATGCCGGG
ATTACCGTAG CCCAGAAGTC CAACATCGGC ATCACTTCAG GTAATTCGTT GACGGTGGCC
GCAACGCTTG AAGCGGCCAA GCAGGCAGTG TTACTGATGA AGGGGGGCAA ACCGGAACAT
GTGCGGGCCG TCGTGATTGG GGCAACCGGT TCGATTGGCG CCGTCTGTGC CCGCTTGCTG
GCACAGGCAG TACACGATGT CGTACTGGTT GCACCGCGTG CCGAACGGTT GATCGCGCTT
AAGAAACAGA TCGAATCCGA GACGCCGGGA GCGCGGGTTG TGGCCGCGAC CTATGCTGAT
GCCTATCTCG GTGACGCCGA TTTGATTATC ACTACGACCA GTGCTCTGAC CGGTAAAGTC
ATTAATGTCG ATAAACTCAA ACCCGGAGCA GTGGTGTGCG ATGTGGCTCG CCCACCTGAT
GTAAAAGAGG AAGATGCACG GCGACGGCCC GATGTACTGG TGATTGAGAG TGGTGAGATC
GTGTTACCCG GTGAGCCGGA TTTTGGCTTT GATATCGATA TGCCACCCGG TACGGCCTAC
GCCTGTCTCG CCGAAACGGC GCTACTGGCA ATGGAAGGCA AGTTTGAAGA TTATACCCTT
GGTCGCAATA TCGAAATCGA GCGGGTAAAA GAGGTTTACC GACTTTGGAA AAAACACGGC
CTCGAACTCG CTCGTCTGCG CTCGTTTGGG GTGTATGTAA CCGACGAGAT GATCGCCGAG
AAGCGGCGGT TAGCCGAAGA ACGACGGCGT CAGTTGGGCT TGCCGGCGGA TAAGGTGTGT
GAGTAG
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| Protein sequence | MKRVVSISLG SAQRDYQITA TVLGRQVEVR RIGTNGDVAQ AMALIREFDG NVDAIGLGGL
TPVFRIGRAR YPHQEAIHIA AQARRTPVVD GGVVKAILER WAIAQAVRQI PSLVRYKRVL
IASGVERYQL AAAIAQYEPE LRFADPIIHA GLPFLPPPRS LEQLELYAAT ALPLLALLPY
RFIHPVALGQ EGYDPRAAAL FQWADVIAGD FAFIRRFAPA DLTRKAVITD DPSPAEIEDL
RRRGVTTLVT MTPPLSDERP FLAADAIEAI ITAITESTRQ PGDAEVIDFI TAAGWGPTVQ
DLNPRPKPRF AFVIHPLRTE LIANHRWFRW TRYLPPRLVE LVAAEFPPLY LSRIRGIRSK
ATGEEVEGIL LTLGTTPREM MRRPPSFTYR RLIKAARMAE RMGAQIMGLG AFTSVVGDAG
ITVAQKSNIG ITSGNSLTVA ATLEAAKQAV LLMKGGKPEH VRAVVIGATG SIGAVCARLL
AQAVHDVVLV APRAERLIAL KKQIESETPG ARVVAATYAD AYLGDADLII TTTSALTGKV
INVDKLKPGA VVCDVARPPD VKEEDARRRP DVLVIESGEI VLPGEPDFGF DIDMPPGTAY
ACLAETALLA MEGKFEDYTL GRNIEIERVK EVYRLWKKHG LELARLRSFG VYVTDEMIAE
KRRLAEERRR QLGLPADKVC E
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