Gene Cagg_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0658 
Symbol 
ID7266909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp812094 
End bp812879 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID643565520 
Productprotein of unknown function DUF990 
Protein accessionYP_002462030 
Protein GI219847597 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000260667 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAGTA TACGCTTAAT GGTCGTGTTT GCGCGCGTTG GCATCCTCAA CGAGTTGCAA 
TATCGGGTAA ATTTCTTCTT TCAAGTGCTG GAGTCGGCGA TCAGTTTGGT GACCGGCCTG
ATCGGGTTGG GATTAGTCTT CCGTCACACC ACCGTGTTAG CCGGTTGGAC ACCGCCAGAA
CTACTGGTTG TCATGGGGAT CTATGTCTTG ATGAGCGGGG TGGTGCAGGC GGTGATCCAG
CCGAATATGT TGCGATTGGC GCAAGATGTT CTCGAAGGGA AGCTCGATTA CGTATTGACT
AAGCCGGTGG ATACGCAGTT GTTGCTCAGC ATCCGTGAGT GGCAGGCATG GCGTTTTACT
AACGTTCTTG TGGGCTTGCT CGTAATTGGT TGGGCATTGA TATGGATGCA GGCCGATCTA
CAGATCGGTA CGGTGATACT GTTTGTCATG ACCCTTGTAT GTGGGCTGAT CGTACTCTAT
GCGTTTTGGT TGATCTTAGC AACAACGAGT TTCTGGGTTA TTCAGATCGA AAGCCTGATC
AATCTATTTG AGGGAGTTTT TGCTGCCGGA CGTTGGCCGG TCAGCATCTA TCCATCGTGG
TTACGCGCCT TGCTTACCTT TGTGGTGCCG GTTGCGTTTG CCGTGACCGT CCCTGCCGAA
ACGCTCACCG ATCGCCTGAC GCCACAGACA CTTGCATTGG CGATAGGTAT GAGTGTGGGT
TTGCTGCTTA TTGCTCGCCG GTTTTTGCGA TGGGGTCTCA GCCGTTATAG TGGGGCCGGT
GCTTAG
 
Protein sequence
MDSIRLMVVF ARVGILNELQ YRVNFFFQVL ESAISLVTGL IGLGLVFRHT TVLAGWTPPE 
LLVVMGIYVL MSGVVQAVIQ PNMLRLAQDV LEGKLDYVLT KPVDTQLLLS IREWQAWRFT
NVLVGLLVIG WALIWMQADL QIGTVILFVM TLVCGLIVLY AFWLILATTS FWVIQIESLI
NLFEGVFAAG RWPVSIYPSW LRALLTFVVP VAFAVTVPAE TLTDRLTPQT LALAIGMSVG
LLLIARRFLR WGLSRYSGAG A