| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0565 |
|---|
| Symbol | |
|---|
| ID | 7267062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 700947 |
|---|
| End bp | 701555 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565428 |
|---|
| Product | CRISPR-associated protein Cas4 |
|---|
| Protein accession | YP_002461940 |
|---|
| Protein GI | 219847507 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1468] RecB family exonuclease |
|---|
| TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.234335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.250424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGC CTGATCTTGA AACAGTTGAA GTCAGCGACA TTAAACAATG GCGCTACTGC
CCGCGCGTCG TGTGGTACGC ATATTGCTTG CCGGCCATCC GGCCCAAGAC CGATCTCATG
CGGCAGGGAG CGGCCAGCCA CCGGGCGGAA GAAGATCGCG AAGCGCGGCG GTCACTGCGC
ACCTACGGCT TAAAAAGCGG CGAACGGTTC TTCAACGTCT ATCTGCGGTC AGAGCGGCTC
GGCGTCAGGG GTATCCTCGA TCTAGCGATT GCCGTCCCCA ACCGGAGCGA CCCAGCGGCG
AAAGCGGTGG TGGTTGATTA TAAAGACAGT GAGCAACCGT CCGGTCCGCA TTTCAAGTTA
CAAGTTGGGG CCTACGCACT CTTGATTGAA GAAGCATGGG GTTTACCGGT TGAGACTGGC
TGGATCTATC ATATTCCGCT ACGTAAAGCG GAGAAAGTTC CGATCAGTCC ACAATTACGT
CGCAATGTTC TTGACACCAT CGCAGCGGTT CAACGTGCCA TCAAGACTGA AGCACTGCCA
CCACCGCCGA CGAGCCGGGC GATGTGCGTT AATTGTGAAT TTCGTCGCTT CTGTAACGAT
GTTGTGTGA
|
|---|
| Protein sequence | MTMPDLETVE VSDIKQWRYC PRVVWYAYCL PAIRPKTDLM RQGAASHRAE EDREARRSLR
TYGLKSGERF FNVYLRSERL GVRGILDLAI AVPNRSDPAA KAVVVDYKDS EQPSGPHFKL
QVGAYALLIE EAWGLPVETG WIYHIPLRKA EKVPISPQLR RNVLDTIAAV QRAIKTEALP
PPPTSRAMCV NCEFRRFCND VV
|
|---|
| |