Gene Cagg_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0560 
Symbol 
ID7267057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp681920 
End bp682885 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content52% 
IMG OID643565423 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_002461935 
Protein GI219847502 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.415622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATACGT TGACCGTTTT TCAACGCCAC GGTTTTCAAG CCGTGACCGA TCTCGATCAA 
ATCAGCGATT TGTTGATGCA GCCACGCACG CTGATCTGGC TCGATCTCGA ACAGCCCACC
GCGTCAGAAA TCGAACGTTT GCGCGCAGAA TTCGGCTTTC ACCCGCTTGC CTTGGAAGAT
GCCTTGCAAG AGCATGAACG GCCAAAGATC GAGACGTATC CCGGCTATTA CCTTATCATT
TTCTATAGCG TTGGGTACAA TGCTTCGGAA CGGTCACTCC AGTTTCTACC GATCACGCTG
TTTGTCGGTG CAAATTATTT GGTCAGTATC AGAAGTGGTC CGGTACGCCA CGTCCAGCAG
ACGCTGGCCC GCTGGCAGAC GAATAGCCAT GTGCCCGGCT ATCAGGTGAG TAGCGTGCTC
TATGCGCTAA TCGATGCTAT TGTTGATGAC TACTTTGTCG TGCTTGACCA GATCGGCGAG
CAGATCGACG AAGTCGAGGA AGCGATCTTT CAGCGGGGCC GCCAAGAGGT CGCCAGCGAG
ATTTTCACGC TCAAGAAAGA TTTGCTCCTC TTCCGCCGCA TTGTTGCGCC TGAACGTGAT
ATCCTTAATG TGTTGCTCCG TCAAGAGGTA CGCATCTTTC AGCCACGCGA ACTTGCCTAT
GTGCGCGATG TCTACGATCA TCTTGTGCGC TTGACCGAGT CGATTGACCT CTACCGCGAT
CTGTTGTCGA GTGCGCTCGA TAGCTATCTG TCGCTCCAAG GCAACCAGCT TAATCAGTTG
GTGAAAGTCC TGACCCTCTG GTCAATTATT TTAATGGCGT GCTCGCTCGT AGCCGGTATC
TACGGTATGA ATTTCGTGTT CATGCCCGAA CTTGAACAGC CATGGGGCTA TCCCTTTGCC
TTAGGTCTTA TGCTGACCAT TGCCGTTGGT CTGGGTATCT ACTTTAAACG GAGCAATTGG
TGGTGA
 
Protein sequence
MHTLTVFQRH GFQAVTDLDQ ISDLLMQPRT LIWLDLEQPT ASEIERLRAE FGFHPLALED 
ALQEHERPKI ETYPGYYLII FYSVGYNASE RSLQFLPITL FVGANYLVSI RSGPVRHVQQ
TLARWQTNSH VPGYQVSSVL YALIDAIVDD YFVVLDQIGE QIDEVEEAIF QRGRQEVASE
IFTLKKDLLL FRRIVAPERD ILNVLLRQEV RIFQPRELAY VRDVYDHLVR LTESIDLYRD
LLSSALDSYL SLQGNQLNQL VKVLTLWSII LMACSLVAGI YGMNFVFMPE LEQPWGYPFA
LGLMLTIAVG LGIYFKRSNW W