Gene Cagg_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0533 
Symbol 
ID7267030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp653778 
End bp655223 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content49% 
IMG OID643565396 
Producthypothetical protein 
Protein accessionYP_002461908 
Protein GI219847475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0333949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCATC TCATCCTAGC CCTCCTCGCC ATTGTATTGC TTGCGACTGC ATTACCAACA 
GCGGCACAGA CACCGGCCAT TACCACAACC CTCTATGTAC CGATCGTTGC TTCGCATGCG
ATTCGACCGC TCGGGTTTGA GACAAATACA GGTTGGCTGT ACAGTTCACA AGTTAAACCA
CGCGCCCAAG CTCTCAATGC GCACTGGGTA CGACTCAACA CGCTGAGTTG GCGGGAAGCG
CAACCTACTC CAACCAGCCC GATCAATTGG AGTGCGCCTA GCTTTCAACG ATTCGAGCAA
GAAGTCTTGG CTGCCAATGA GCTAGGGCTG CAAGTAATGG CGATCATTGA CGATCACCCA
TCGTGGGCGA CCGGGAGCAG CCATATCTGC GCGGCCATTC TTGACGAATA CCATGATGAA
TTTGCCATAT TTGTACGAGA AGTTGTTGCA AAATACAGCC AAGCTCCATA TTTAGTCCGT
TACTGGGAAC TAGGTAATGA ACCAGATGTT GATCCTATTC TTGTTCCTAC TAACTCTCAA
TTCGGCTGTT GGGGCAATAT TGCCGATGAG TATTATGGTG GTGAGCGGTA TGGTAGGATG
CTAAAGGTTG TAATCCCAGC AATTCGGGCT GCCGATCCGG GTGCAAAAGT TGTTTTCGGC
GGTTTGTTAC TAGCACGTCC TGAGAATCAG CCAACGAATA CAGATGGCAA ACCGTTCAAT
TTCTTAGAGG GTGCTCTACG CGCCGGTGCC GGCCCATATT TTGACATTTT AGCGTTTCAT
AGCTATCCGA GCTATATTGC CAATGTTCCG GGAGTCCCTA ATGTTGATTT TGATCTCCAT
GAATATAGTC TCAACGGTGC TTGGAAAAAT CGAGGAGGGA CAACGATCGG CAAAATTCGC
TTCCTCCGTG ACGTGATGCA ACGCTACGGC ATTAACAAAC CACTCTTTCT GAATGAGACC
GGTTTACGAT GTATGAATGA ATATTTCGAT TGTAATTCTA TACTGCCCCA ATTTGAACAG
GCAAAAGCCA ACCATCTGAT CCGTACATCG ATGCGGGCGA TGGCTGAAGG GGTTGAAGCG
TATATCTGGT ATACCTTGCA AGGTCCCGGG TGGAGCTATA CGAGCTTACT GAACGACAGT
CAGCAGCCAA AGCCGGCCTA CAATGCGATG CAATTCGCCA TTCAACGTCT CAATGAAGTA
CGGATACCAC CGCAAGCGTT TAATGGTTAT GGAAGTGGCC TGGAAGCCTA TCGCTTCCAA
GGGAACGGCT TTGTGCTTGA TGTGATCTGG TCAACTGATG GGACACCGCG CCAGATTACG
TTACCGGCCA CATCGGTTAT TGCCGCTTAT ACGCGCGATG GCACACCGAT TATTCCGACC
ATCAGCGGCT CAACAGCAAT CTTTAATGTT GGGTTTGAAA ACATTTATCT GAAACGACAA
CCGTAA
 
Protein sequence
MHHLILALLA IVLLATALPT AAQTPAITTT LYVPIVASHA IRPLGFETNT GWLYSSQVKP 
RAQALNAHWV RLNTLSWREA QPTPTSPINW SAPSFQRFEQ EVLAANELGL QVMAIIDDHP
SWATGSSHIC AAILDEYHDE FAIFVREVVA KYSQAPYLVR YWELGNEPDV DPILVPTNSQ
FGCWGNIADE YYGGERYGRM LKVVIPAIRA ADPGAKVVFG GLLLARPENQ PTNTDGKPFN
FLEGALRAGA GPYFDILAFH SYPSYIANVP GVPNVDFDLH EYSLNGAWKN RGGTTIGKIR
FLRDVMQRYG INKPLFLNET GLRCMNEYFD CNSILPQFEQ AKANHLIRTS MRAMAEGVEA
YIWYTLQGPG WSYTSLLNDS QQPKPAYNAM QFAIQRLNEV RIPPQAFNGY GSGLEAYRFQ
GNGFVLDVIW STDGTPRQIT LPATSVIAAY TRDGTPIIPT ISGSTAIFNV GFENIYLKRQ
P